Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
C11orf88Q6PI97 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C11orf88Q6PI97 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C11orf88Q6PI97 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.43■□□□□ 0.38
C11orf88Q6PI97 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 AC010141.3-201ENST00000456659 717 ntBASIC17.42■□□□□ 0.38
C11orf88Q6PI97 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 AC116562.4-201ENST00000641316 2276 ntBASIC17.42■□□□□ 0.38
C11orf88Q6PI97 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
C11orf88Q6PI97 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms