Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDCP2Q5VXM1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.2■□□□□ 0.66
CDCP2Q5VXM1 MIR1238-201ENST00000408483 83 ntBASIC19.2■□□□□ 0.66
CDCP2Q5VXM1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDCP2Q5VXM1 AC116562.2-201ENST00000507042 360 ntBASIC19.2■□□□□ 0.66
CDCP2Q5VXM1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.2■□□□□ 0.66
CDCP2Q5VXM1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.2■□□□□ 0.66
CDCP2Q5VXM1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDCP2Q5VXM1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CDCP2Q5VXM1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.2■□□□□ 0.66
CDCP2Q5VXM1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.2■□□□□ 0.66
CDCP2Q5VXM1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDCP2Q5VXM1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CDCP2Q5VXM1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CDCP2Q5VXM1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CDCP2Q5VXM1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDCP2Q5VXM1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.19■□□□□ 0.66
CDCP2Q5VXM1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CDCP2Q5VXM1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.19■□□□□ 0.66
CDCP2Q5VXM1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDCP2Q5VXM1 AC113347.1-201ENST00000413321 391 ntBASIC19.19■□□□□ 0.66
CDCP2Q5VXM1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.19■□□□□ 0.66
CDCP2Q5VXM1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.19■□□□□ 0.66
CDCP2Q5VXM1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.19■□□□□ 0.66
CDCP2Q5VXM1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDCP2Q5VXM1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.19■□□□□ 0.66
CDCP2Q5VXM1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.19■□□□□ 0.66
CDCP2Q5VXM1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.19■□□□□ 0.66
CDCP2Q5VXM1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CDCP2Q5VXM1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDCP2Q5VXM1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDCP2Q5VXM1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDCP2Q5VXM1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CDCP2Q5VXM1 LINC01568-207ENST00000641790 1380 ntBASIC19.19■□□□□ 0.66
CDCP2Q5VXM1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CDCP2Q5VXM1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDCP2Q5VXM1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDCP2Q5VXM1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDCP2Q5VXM1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDCP2Q5VXM1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDCP2Q5VXM1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.18■□□□□ 0.66
CDCP2Q5VXM1 FITM1-202ENST00000559294 800 ntBASIC19.18■□□□□ 0.66
CDCP2Q5VXM1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.18■□□□□ 0.66
CDCP2Q5VXM1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.18■□□□□ 0.66
CDCP2Q5VXM1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDCP2Q5VXM1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDCP2Q5VXM1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDCP2Q5VXM1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.18■□□□□ 0.66
CDCP2Q5VXM1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDCP2Q5VXM1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.18■□□□□ 0.66
CDCP2Q5VXM1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.17■□□□□ 0.66
CDCP2Q5VXM1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDCP2Q5VXM1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDCP2Q5VXM1 GUSBP5-202ENST00000510805 1989 ntBASIC19.17■□□□□ 0.66
CDCP2Q5VXM1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.17■□□□□ 0.66
CDCP2Q5VXM1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDCP2Q5VXM1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.17■□□□□ 0.66
CDCP2Q5VXM1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDCP2Q5VXM1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDCP2Q5VXM1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.17■□□□□ 0.66
CDCP2Q5VXM1 KSR1P1-201ENST00000446298 240 ntBASIC19.17■□□□□ 0.66
CDCP2Q5VXM1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDCP2Q5VXM1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.17■□□□□ 0.66
CDCP2Q5VXM1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.17■□□□□ 0.66
CDCP2Q5VXM1 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.17■□□□□ 0.66
CDCP2Q5VXM1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.17■□□□□ 0.66
CDCP2Q5VXM1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CDCP2Q5VXM1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDCP2Q5VXM1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CDCP2Q5VXM1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.17■□□□□ 0.66
CDCP2Q5VXM1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDCP2Q5VXM1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 NIFKP9-201ENST00000419265 221 ntBASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 NAPSB-206ENST00000562112 1266 ntBASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 CYP2D8P-201ENST00000433633 1490 ntBASIC19.16■□□□□ 0.66
CDCP2Q5VXM1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.15■□□□□ 0.66
CDCP2Q5VXM1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDCP2Q5VXM1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDCP2Q5VXM1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDCP2Q5VXM1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms