Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39BQ5VTQ0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TTC39BQ5VTQ0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC39BQ5VTQ0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC39BQ5VTQ0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.95■□□□□ 0.94
TTC39BQ5VTQ0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC39BQ5VTQ0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.95■□□□□ 0.94
TTC39BQ5VTQ0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC39BQ5VTQ0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.95■□□□□ 0.94
TTC39BQ5VTQ0 AL121603.2-201ENST00000557373 2117 ntBASIC20.95■□□□□ 0.94
TTC39BQ5VTQ0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC39BQ5VTQ0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.95■□□□□ 0.94
TTC39BQ5VTQ0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
TTC39BQ5VTQ0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
TTC39BQ5VTQ0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TTC39BQ5VTQ0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TTC39BQ5VTQ0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TTC39BQ5VTQ0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TTC39BQ5VTQ0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TTC39BQ5VTQ0 C2orf69P4-201ENST00000565394 541 ntBASIC20.94■□□□□ 0.94
TTC39BQ5VTQ0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TTC39BQ5VTQ0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.94■□□□□ 0.94
TTC39BQ5VTQ0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TTC39BQ5VTQ0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TTC39BQ5VTQ0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TTC39BQ5VTQ0 KRT8P36-201ENST00000489121 1440 ntBASIC20.94■□□□□ 0.94
TTC39BQ5VTQ0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TTC39BQ5VTQ0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TTC39BQ5VTQ0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TTC39BQ5VTQ0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TTC39BQ5VTQ0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TTC39BQ5VTQ0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TTC39BQ5VTQ0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.93■□□□□ 0.94
TTC39BQ5VTQ0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TTC39BQ5VTQ0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.93■□□□□ 0.94
TTC39BQ5VTQ0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.93■□□□□ 0.94
TTC39BQ5VTQ0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.93■□□□□ 0.94
TTC39BQ5VTQ0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.93■□□□□ 0.94
TTC39BQ5VTQ0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.93■□□□□ 0.94
TTC39BQ5VTQ0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.93■□□□□ 0.94
TTC39BQ5VTQ0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.93■□□□□ 0.94
TTC39BQ5VTQ0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TTC39BQ5VTQ0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.93■□□□□ 0.94
TTC39BQ5VTQ0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TTC39BQ5VTQ0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.93■□□□□ 0.94
TTC39BQ5VTQ0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TTC39BQ5VTQ0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TTC39BQ5VTQ0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TTC39BQ5VTQ0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 HLA-B-256ENST00000639848 1089 ntBASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TTC39BQ5VTQ0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39BQ5VTQ0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39BQ5VTQ0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39BQ5VTQ0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39BQ5VTQ0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39BQ5VTQ0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39BQ5VTQ0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39BQ5VTQ0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39BQ5VTQ0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39BQ5VTQ0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.91■□□□□ 0.94
TTC39BQ5VTQ0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TTC39BQ5VTQ0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
TTC39BQ5VTQ0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39BQ5VTQ0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.91■□□□□ 0.94
TTC39BQ5VTQ0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
TTC39BQ5VTQ0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.91■□□□□ 0.94
TTC39BQ5VTQ0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TTC39BQ5VTQ0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 RNA5SP413-201ENST00000516373 109 ntBASIC20.9■□□□□ 0.94
TTC39BQ5VTQ0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms