Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATPAF1Q5TC12 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.41■□□□□ 0.38
ATPAF1Q5TC12 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATPAF1Q5TC12 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATPAF1Q5TC12 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ATPAF1Q5TC12 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATPAF1Q5TC12 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ATPAF1Q5TC12 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 AC245052.3-201ENST00000450182 901 ntBASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 AC092437.1-201ENST00000624794 1048 ntBASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF1Q5TC12 AC116562.4-201ENST00000641316 2276 ntBASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 RBM17P2-201ENST00000616397 1405 ntBASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 AC098818.2-201ENST00000564925 2320 ntBASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 RARRES2P11-201ENST00000635158 484 ntBASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ATPAF1Q5TC12 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 FP700111.2-201ENST00000619190 1892 ntBASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF1Q5TC12 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms