Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB5BP61020 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB5BP61020 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
RAB5BP61020 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB5BP61020 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB5BP61020 HES6-205ENST00000409356 528 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB5BP61020 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.81■□□□□ 0.12
RAB5BP61020 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RAB5BP61020 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB5BP61020 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB5BP61020 Z82202.1-201ENST00000623446 1880 ntBASIC15.81■□□□□ 0.12
RAB5BP61020 AC141586.5-201ENST00000624546 2050 ntBASIC15.81■□□□□ 0.12
RAB5BP61020 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB5BP61020 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB5BP61020 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB5BP61020 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.81■□□□□ 0.12
RAB5BP61020 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB5BP61020 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB5BP61020 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 CROCCP1-201ENST00000426910 5675 ntBASIC15.8■□□□□ 0.12
RAB5BP61020 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB5BP61020 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RAB5BP61020 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB5BP61020 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RAB5BP61020 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RAB5BP61020 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.8■□□□□ 0.12
RAB5BP61020 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB5BP61020 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RAB5BP61020 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RAB5BP61020 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RAB5BP61020 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB5BP61020 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB5BP61020 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.8■□□□□ 0.12
RAB5BP61020 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB5BP61020 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB5BP61020 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB5BP61020 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB5BP61020 NFIC-211ENST00000641145 8399 ntBASIC15.79■□□□□ 0.12
RAB5BP61020 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB5BP61020 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB5BP61020 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB5BP61020 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB5BP61020 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB5BP61020 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB5BP61020 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RAB5BP61020 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB5BP61020 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB5BP61020 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB5BP61020 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB5BP61020 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RAB5BP61020 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RAB5BP61020 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RAB5BP61020 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB5BP61020 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.79■□□□□ 0.12
RAB5BP61020 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB5BP61020 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB5BP61020 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB5BP61020 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB5BP61020 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB5BP61020 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.79■□□□□ 0.12
RAB5BP61020 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB5BP61020 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB5BP61020 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB5BP61020 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB5BP61020 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RAB5BP61020 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB5BP61020 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB5BP61020 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB5BP61020 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB5BP61020 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
RAB5BP61020 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB5BP61020 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB5BP61020 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB5BP61020 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB5BP61020 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB5BP61020 REST-210ENST00000638187 1334 ntTSL 5 BASIC15.78■□□□□ 0.12
RAB5BP61020 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB5BP61020 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms