Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
APOC4P55056 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC4P55056 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.76□□□□□ -0.05
APOC4P55056 HCG11-201ENST00000411553 5696 ntBASIC14.76□□□□□ -0.05
APOC4P55056 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC4P55056 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC4P55056 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC4P55056 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOC4P55056 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC4P55056 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC4P55056 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOC4P55056 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC4P55056 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.76□□□□□ -0.05
APOC4P55056 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC4P55056 GCSHP5-201ENST00000443090 522 ntBASIC14.76□□□□□ -0.05
APOC4P55056 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOC4P55056 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.76□□□□□ -0.05
APOC4P55056 PRKY-204ENST00000533551 1019 ntBASIC14.76□□□□□ -0.05
APOC4P55056 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
APOC4P55056 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.76□□□□□ -0.05
APOC4P55056 AC006557.6-201ENST00000623071 864 ntBASIC14.76□□□□□ -0.05
APOC4P55056 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOC4P55056 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC4P55056 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
APOC4P55056 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC14.76□□□□□ -0.05
APOC4P55056 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
APOC4P55056 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
APOC4P55056 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
APOC4P55056 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC14.75□□□□□ -0.05
APOC4P55056 AC006128.1-201ENST00000624704 1661 ntBASIC14.75□□□□□ -0.05
APOC4P55056 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
APOC4P55056 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.75□□□□□ -0.05
APOC4P55056 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
APOC4P55056 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.75□□□□□ -0.05
APOC4P55056 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC4P55056 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
APOC4P55056 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.75□□□□□ -0.05
APOC4P55056 C1QBPP2-201ENST00000528754 825 ntBASIC14.75□□□□□ -0.05
APOC4P55056 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.75□□□□□ -0.05
APOC4P55056 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.75□□□□□ -0.05
APOC4P55056 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.75□□□□□ -0.05
APOC4P55056 AC120498.8-201ENST00000614275 531 ntBASIC14.75□□□□□ -0.05
APOC4P55056 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC4P55056 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC14.75□□□□□ -0.05
APOC4P55056 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC4P55056 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC4P55056 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC4P55056 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC14.75□□□□□ -0.05
APOC4P55056 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.75□□□□□ -0.05
APOC4P55056 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
APOC4P55056 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOC4P55056 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
APOC4P55056 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.75□□□□□ -0.05
APOC4P55056 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
APOC4P55056 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.74□□□□□ -0.05
APOC4P55056 WWC2-AS2-201ENST00000578387 2183 ntBASIC14.74□□□□□ -0.05
APOC4P55056 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC4P55056 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.74□□□□□ -0.05
APOC4P55056 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.74□□□□□ -0.05
APOC4P55056 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC4P55056 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.74□□□□□ -0.05
APOC4P55056 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
APOC4P55056 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC4P55056 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC4P55056 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOC4P55056 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC4P55056 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
APOC4P55056 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.74□□□□□ -0.05
APOC4P55056 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.74□□□□□ -0.05
APOC4P55056 UBE2SP1-201ENST00000450587 669 ntBASIC14.74□□□□□ -0.05
APOC4P55056 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.74□□□□□ -0.05
APOC4P55056 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOC4P55056 AC098590.1-201ENST00000468126 897 ntBASIC14.74□□□□□ -0.05
APOC4P55056 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.74□□□□□ -0.05
APOC4P55056 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
APOC4P55056 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
APOC4P55056 AC066615.1-201ENST00000640911 628 ntBASIC14.74□□□□□ -0.05
APOC4P55056 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOC4P55056 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC4P55056 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.74□□□□□ -0.05
APOC4P55056 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
APOC4P55056 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC4P55056 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.74□□□□□ -0.05
APOC4P55056 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC4P55056 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
APOC4P55056 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC4P55056 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOC4P55056 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOC4P55056 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.74□□□□□ -0.05
APOC4P55056 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.73□□□□□ -0.05
APOC4P55056 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.73□□□□□ -0.05
APOC4P55056 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC4P55056 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC4P55056 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC14.73□□□□□ -0.05
APOC4P55056 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOC4P55056 PLK5-205ENST00000642079 1969 ntBASIC14.73□□□□□ -0.05
APOC4P55056 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOC4P55056 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOC4P55056 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOC4P55056 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms