Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.18■□□□□ 0.66
KNTC1P50748 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KNTC1P50748 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.18■□□□□ 0.66
KNTC1P50748 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
KNTC1P50748 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
KNTC1P50748 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.18■□□□□ 0.66
KNTC1P50748 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.18■□□□□ 0.66
KNTC1P50748 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KNTC1P50748 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
KNTC1P50748 PTBP1P-201ENST00000554374 1601 ntBASIC19.18■□□□□ 0.66
KNTC1P50748 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
KNTC1P50748 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KNTC1P50748 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KNTC1P50748 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KNTC1P50748 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KNTC1P50748 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
KNTC1P50748 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.17■□□□□ 0.66
KNTC1P50748 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.17■□□□□ 0.66
KNTC1P50748 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KNTC1P50748 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KNTC1P50748 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KNTC1P50748 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KNTC1P50748 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
KNTC1P50748 MIR1238-201ENST00000408483 83 ntBASIC19.17■□□□□ 0.66
KNTC1P50748 AK4P3-201ENST00000418260 669 ntBASIC19.17■□□□□ 0.66
KNTC1P50748 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.17■□□□□ 0.66
KNTC1P50748 AP000525.1-201ENST00000608286 694 ntBASIC19.17■□□□□ 0.66
KNTC1P50748 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.17■□□□□ 0.66
KNTC1P50748 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.17■□□□□ 0.66
KNTC1P50748 AC011484.1-201ENST00000377652 1995 ntBASIC19.17■□□□□ 0.66
KNTC1P50748 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KNTC1P50748 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.16■□□□□ 0.66
KNTC1P50748 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
KNTC1P50748 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KNTC1P50748 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.16■□□□□ 0.66
KNTC1P50748 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KNTC1P50748 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
KNTC1P50748 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KNTC1P50748 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.16■□□□□ 0.66
KNTC1P50748 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.16■□□□□ 0.66
KNTC1P50748 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.16■□□□□ 0.66
KNTC1P50748 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.16■□□□□ 0.66
KNTC1P50748 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
KNTC1P50748 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KNTC1P50748 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.16■□□□□ 0.66
KNTC1P50748 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
KNTC1P50748 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
KNTC1P50748 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
KNTC1P50748 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KNTC1P50748 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KNTC1P50748 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.16■□□□□ 0.66
KNTC1P50748 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.16■□□□□ 0.66
KNTC1P50748 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KNTC1P50748 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
KNTC1P50748 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
KNTC1P50748 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.15■□□□□ 0.66
KNTC1P50748 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KNTC1P50748 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
KNTC1P50748 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
KNTC1P50748 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.15■□□□□ 0.66
KNTC1P50748 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KNTC1P50748 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.15■□□□□ 0.66
KNTC1P50748 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KNTC1P50748 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
KNTC1P50748 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KNTC1P50748 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KNTC1P50748 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.15■□□□□ 0.66
KNTC1P50748 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KNTC1P50748 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
KNTC1P50748 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
KNTC1P50748 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
KNTC1P50748 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
KNTC1P50748 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.14■□□□□ 0.66
KNTC1P50748 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
KNTC1P50748 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
KNTC1P50748 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
KNTC1P50748 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.14■□□□□ 0.65
KNTC1P50748 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KNTC1P50748 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KNTC1P50748 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KNTC1P50748 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
KNTC1P50748 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
KNTC1P50748 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KNTC1P50748 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KNTC1P50748 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KNTC1P50748 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KNTC1P50748 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
KNTC1P50748 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
KNTC1P50748 NIFKP9-201ENST00000419265 221 ntBASIC19.14■□□□□ 0.65
KNTC1P50748 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KNTC1P50748 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.14■□□□□ 0.65
KNTC1P50748 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
KNTC1P50748 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
KNTC1P50748 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.14■□□□□ 0.65
KNTC1P50748 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
KNTC1P50748 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
KNTC1P50748 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.13■□□□□ 0.65
KNTC1P50748 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
KNTC1P50748 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.13■□□□□ 0.65
KNTC1P50748 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms