Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CBX5P45973 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CBX5P45973 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CBX5P45973 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CBX5P45973 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CBX5P45973 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CBX5P45973 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX5P45973 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.26■□□□□ 0.35
CBX5P45973 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.26■□□□□ 0.35
CBX5P45973 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CBX5P45973 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX5P45973 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CBX5P45973 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX5P45973 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX5P45973 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CBX5P45973 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CBX5P45973 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.26■□□□□ 0.35
CBX5P45973 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CBX5P45973 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CBX5P45973 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CBX5P45973 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.26■□□□□ 0.35
CBX5P45973 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX5P45973 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.26■□□□□ 0.35
CBX5P45973 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX5P45973 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX5P45973 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX5P45973 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CBX5P45973 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.26■□□□□ 0.35
CBX5P45973 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.26■□□□□ 0.35
CBX5P45973 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX5P45973 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX5P45973 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX5P45973 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBX5P45973 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.25■□□□□ 0.35
CBX5P45973 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBX5P45973 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.25■□□□□ 0.35
CBX5P45973 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX5P45973 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.25■□□□□ 0.35
CBX5P45973 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX5P45973 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX5P45973 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBX5P45973 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CBX5P45973 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.25■□□□□ 0.35
CBX5P45973 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.25■□□□□ 0.35
CBX5P45973 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX5P45973 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CBX5P45973 AC105233.4-201ENST00000642045 216 ntBASIC17.25■□□□□ 0.35
CBX5P45973 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.25■□□□□ 0.35
CBX5P45973 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBX5P45973 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX5P45973 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBX5P45973 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBX5P45973 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX5P45973 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBX5P45973 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBX5P45973 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CBX5P45973 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX5P45973 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBX5P45973 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX5P45973 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBX5P45973 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX5P45973 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX5P45973 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX5P45973 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBX5P45973 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBX5P45973 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.24■□□□□ 0.35
CBX5P45973 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX5P45973 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.24■□□□□ 0.35
CBX5P45973 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.24■□□□□ 0.35
CBX5P45973 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX5P45973 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX5P45973 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBX5P45973 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBX5P45973 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX5P45973 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CBX5P45973 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX5P45973 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CBX5P45973 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.24■□□□□ 0.35
CBX5P45973 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CBX5P45973 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CBX5P45973 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX5P45973 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX5P45973 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CBX5P45973 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CBX5P45973 AC020916.1-201ENST00000587762 1774 ntBASIC17.23■□□□□ 0.35
CBX5P45973 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX5P45973 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX5P45973 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CBX5P45973 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CBX5P45973 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.23■□□□□ 0.35
CBX5P45973 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CBX5P45973 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX5P45973 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX5P45973 AC018445.3-201ENST00000624177 1945 ntBASIC17.23■□□□□ 0.35
CBX5P45973 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX5P45973 AC061975.6-201ENST00000579045 1553 ntBASIC17.23■□□□□ 0.35
CBX5P45973 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX5P45973 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX5P45973 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CBX5P45973 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms