Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CDKN1AP38936 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDKN1AP38936 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDKN1AP38936 AC133681.1-201ENST00000465482 601 ntBASIC17.18■□□□□ 0.34
CDKN1AP38936 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.18■□□□□ 0.34
CDKN1AP38936 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CDKN1AP38936 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDKN1AP38936 REXO1L12P-201ENST00000622156 912 ntBASIC17.18■□□□□ 0.34
CDKN1AP38936 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CDKN1AP38936 AC011484.1-201ENST00000377652 1995 ntBASIC17.18■□□□□ 0.34
CDKN1AP38936 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CDKN1AP38936 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDKN1AP38936 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDKN1AP38936 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CDKN1AP38936 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDKN1AP38936 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CDKN1AP38936 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDKN1AP38936 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDKN1AP38936 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDKN1AP38936 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN1AP38936 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.17■□□□□ 0.34
CDKN1AP38936 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.17■□□□□ 0.34
CDKN1AP38936 FBXW4P1-201ENST00000426721 2239 ntBASIC17.17■□□□□ 0.34
CDKN1AP38936 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN1AP38936 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
CDKN1AP38936 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.17■□□□□ 0.34
CDKN1AP38936 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.17■□□□□ 0.34
CDKN1AP38936 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN1AP38936 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN1AP38936 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.17■□□□□ 0.34
CDKN1AP38936 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.17■□□□□ 0.34
CDKN1AP38936 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN1AP38936 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN1AP38936 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.17■□□□□ 0.34
CDKN1AP38936 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.17■□□□□ 0.34
CDKN1AP38936 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CDKN1AP38936 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN1AP38936 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN1AP38936 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN1AP38936 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN1AP38936 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN1AP38936 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN1AP38936 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.16■□□□□ 0.34
CDKN1AP38936 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN1AP38936 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN1AP38936 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CDKN1AP38936 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN1AP38936 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.16■□□□□ 0.34
CDKN1AP38936 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.16■□□□□ 0.34
CDKN1AP38936 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.16■□□□□ 0.34
CDKN1AP38936 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN1AP38936 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.16■□□□□ 0.34
CDKN1AP38936 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN1AP38936 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN1AP38936 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.16■□□□□ 0.34
CDKN1AP38936 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDKN1AP38936 AC211429.1-201ENST00000415277 523 ntBASIC17.16■□□□□ 0.34
CDKN1AP38936 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.16■□□□□ 0.34
CDKN1AP38936 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.16■□□□□ 0.34
CDKN1AP38936 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.16■□□□□ 0.34
CDKN1AP38936 PRKY-204ENST00000533551 1019 ntBASIC17.16■□□□□ 0.34
CDKN1AP38936 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.16■□□□□ 0.34
CDKN1AP38936 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN1AP38936 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.16■□□□□ 0.34
CDKN1AP38936 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.16■□□□□ 0.34
CDKN1AP38936 AL049637.2-201ENST00000641778 930 ntBASIC17.16■□□□□ 0.34
CDKN1AP38936 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDKN1AP38936 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.16■□□□□ 0.34
CDKN1AP38936 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN1AP38936 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.16■□□□□ 0.34
CDKN1AP38936 PKD1P6-201ENST00000343738 4769 ntBASIC17.16■□□□□ 0.34
CDKN1AP38936 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN1AP38936 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.16■□□□□ 0.34
CDKN1AP38936 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CDKN1AP38936 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN1AP38936 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN1AP38936 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDKN1AP38936 AC244015.2-201ENST00000616358 1861 ntBASIC17.16■□□□□ 0.34
CDKN1AP38936 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CDKN1AP38936 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.15■□□□□ 0.34
CDKN1AP38936 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.15■□□□□ 0.34
CDKN1AP38936 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.15■□□□□ 0.34
CDKN1AP38936 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN1AP38936 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN1AP38936 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN1AP38936 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN1AP38936 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN1AP38936 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CDKN1AP38936 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.15■□□□□ 0.34
CDKN1AP38936 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.15■□□□□ 0.34
CDKN1AP38936 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CDKN1AP38936 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.15■□□□□ 0.34
CDKN1AP38936 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN1AP38936 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CDKN1AP38936 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDKN1AP38936 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN1AP38936 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN1AP38936 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN1AP38936 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.15■□□□□ 0.34
CDKN1AP38936 KRT17P2-201ENST00000300992 1314 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms