Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
NCLP19338 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCLP19338 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCLP19338 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCLP19338 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC23.79■■□□□ 1.4
NCLP19338 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCLP19338 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCLP19338 EEF1DP3-203ENST00000566025 782 ntBASIC23.79■■□□□ 1.4
NCLP19338 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.79■■□□□ 1.4
NCLP19338 AC053503.5-201ENST00000601508 636 ntBASIC23.79■■□□□ 1.4
NCLP19338 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCLP19338 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.79■■□□□ 1.4
NCLP19338 SMG8-203ENST00000578922 2178 ntBASIC23.79■■□□□ 1.4
NCLP19338 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCLP19338 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.79■■□□□ 1.4
NCLP19338 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCLP19338 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.79■■□□□ 1.4
NCLP19338 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCLP19338 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
NCLP19338 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
NCLP19338 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.78■■□□□ 1.4
NCLP19338 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NCLP19338 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
NCLP19338 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NCLP19338 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
NCLP19338 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.78■■□□□ 1.4
NCLP19338 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NCLP19338 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
NCLP19338 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.78■■□□□ 1.4
NCLP19338 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.78■■□□□ 1.4
NCLP19338 AC116562.4-201ENST00000641316 2276 ntBASIC23.78■■□□□ 1.4
NCLP19338 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC23.78■■□□□ 1.4
NCLP19338 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.78■■□□□ 1.4
NCLP19338 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NCLP19338 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NCLP19338 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NCLP19338 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NCLP19338 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.77■■□□□ 1.4
NCLP19338 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC23.77■■□□□ 1.4
NCLP19338 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
NCLP19338 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
NCLP19338 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
NCLP19338 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCLP19338 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCLP19338 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
NCLP19338 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.77■■□□□ 1.4
NCLP19338 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NCLP19338 TPRG1LP1-201ENST00000598702 760 ntBASIC23.77■■□□□ 1.4
NCLP19338 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
NCLP19338 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCLP19338 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCLP19338 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
NCLP19338 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCLP19338 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.77■■□□□ 1.4
NCLP19338 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.77■■□□□ 1.4
NCLP19338 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCLP19338 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NCLP19338 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NCLP19338 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
NCLP19338 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
NCLP19338 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
NCLP19338 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NCLP19338 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCLP19338 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC23.76■■□□□ 1.39
NCLP19338 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCLP19338 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCLP19338 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.76■■□□□ 1.39
NCLP19338 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCLP19338 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
NCLP19338 NTF6G-201ENST00000591094 616 ntBASIC23.76■■□□□ 1.39
NCLP19338 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.76■■□□□ 1.39
NCLP19338 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCLP19338 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCLP19338 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
NCLP19338 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCLP19338 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCLP19338 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.76■■□□□ 1.39
NCLP19338 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.76■■□□□ 1.39
NCLP19338 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCLP19338 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCLP19338 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCLP19338 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.76■■□□□ 1.39
NCLP19338 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NCLP19338 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
NCLP19338 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NCLP19338 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
NCLP19338 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.75■■□□□ 1.39
NCLP19338 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC23.75■■□□□ 1.39
NCLP19338 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NCLP19338 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NCLP19338 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NCLP19338 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NCLP19338 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NCLP19338 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
NCLP19338 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NCLP19338 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NCLP19338 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
NCLP19338 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NCLP19338 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.75■■□□□ 1.39
NCLP19338 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms