Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PMPCBO75439 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.45■□□□□ 0.86
PMPCBO75439 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PMPCBO75439 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PMPCBO75439 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.44■□□□□ 0.86
PMPCBO75439 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.44■□□□□ 0.86
PMPCBO75439 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PMPCBO75439 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.44■□□□□ 0.86
PMPCBO75439 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PMPCBO75439 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.44■□□□□ 0.86
PMPCBO75439 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.44■□□□□ 0.86
PMPCBO75439 AC090192.1-201ENST00000517740 490 ntBASIC20.44■□□□□ 0.86
PMPCBO75439 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PMPCBO75439 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.44■□□□□ 0.86
PMPCBO75439 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PMPCBO75439 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.44■□□□□ 0.86
PMPCBO75439 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.44■□□□□ 0.86
PMPCBO75439 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.44■□□□□ 0.86
PMPCBO75439 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.44■□□□□ 0.86
PMPCBO75439 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.44■□□□□ 0.86
PMPCBO75439 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.44■□□□□ 0.86
PMPCBO75439 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PMPCBO75439 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
PMPCBO75439 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PMPCBO75439 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.44■□□□□ 0.86
PMPCBO75439 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PMPCBO75439 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PMPCBO75439 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.44■□□□□ 0.86
PMPCBO75439 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PMPCBO75439 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PMPCBO75439 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.43■□□□□ 0.86
PMPCBO75439 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMPCBO75439 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
PMPCBO75439 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
PMPCBO75439 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.43■□□□□ 0.86
PMPCBO75439 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.43■□□□□ 0.86
PMPCBO75439 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PMPCBO75439 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.43■□□□□ 0.86
PMPCBO75439 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMPCBO75439 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMPCBO75439 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PMPCBO75439 NCF1B-203ENST00000435988 1254 ntBASIC20.43■□□□□ 0.86
PMPCBO75439 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.43■□□□□ 0.86
PMPCBO75439 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
PMPCBO75439 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.43■□□□□ 0.86
PMPCBO75439 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.43■□□□□ 0.86
PMPCBO75439 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMPCBO75439 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMPCBO75439 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.43■□□□□ 0.86
PMPCBO75439 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMPCBO75439 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMPCBO75439 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PMPCBO75439 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.43■□□□□ 0.86
PMPCBO75439 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PMPCBO75439 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PMPCBO75439 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.42■□□□□ 0.86
PMPCBO75439 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PMPCBO75439 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PMPCBO75439 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PMPCBO75439 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PMPCBO75439 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.42■□□□□ 0.86
PMPCBO75439 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
PMPCBO75439 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
PMPCBO75439 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PMPCBO75439 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.42■□□□□ 0.86
PMPCBO75439 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.42■□□□□ 0.86
PMPCBO75439 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.42■□□□□ 0.86
PMPCBO75439 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PMPCBO75439 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PMPCBO75439 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PMPCBO75439 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
PMPCBO75439 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.42■□□□□ 0.86
PMPCBO75439 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PMPCBO75439 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PMPCBO75439 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
PMPCBO75439 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PMPCBO75439 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.42■□□□□ 0.86
PMPCBO75439 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.41■□□□□ 0.86
PMPCBO75439 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PMPCBO75439 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.41■□□□□ 0.86
PMPCBO75439 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
PMPCBO75439 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMPCBO75439 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.41■□□□□ 0.86
PMPCBO75439 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.41■□□□□ 0.86
PMPCBO75439 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMPCBO75439 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PMPCBO75439 GPX1P1-201ENST00000388829 606 ntBASIC20.41■□□□□ 0.86
PMPCBO75439 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.41■□□□□ 0.86
PMPCBO75439 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.41■□□□□ 0.86
PMPCBO75439 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMPCBO75439 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMPCBO75439 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.41■□□□□ 0.86
PMPCBO75439 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMPCBO75439 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.41■□□□□ 0.86
PMPCBO75439 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMPCBO75439 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PMPCBO75439 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMPCBO75439 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PMPCBO75439 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.41■□□□□ 0.86
PMPCBO75439 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms