Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
RRP8O43159 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RRP8O43159 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RRP8O43159 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.98■□□□□ 0.63
RRP8O43159 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RRP8O43159 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.98■□□□□ 0.63
RRP8O43159 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.98■□□□□ 0.63
RRP8O43159 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.98■□□□□ 0.63
RRP8O43159 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.98■□□□□ 0.63
RRP8O43159 LINC01238-205ENST00000567549 1107 ntBASIC18.98■□□□□ 0.63
RRP8O43159 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.98■□□□□ 0.63
RRP8O43159 AC091076.1-201ENST00000610741 619 ntBASIC18.98■□□□□ 0.63
RRP8O43159 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.98■□□□□ 0.63
RRP8O43159 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.98■□□□□ 0.63
RRP8O43159 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.98■□□□□ 0.63
RRP8O43159 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.98■□□□□ 0.63
RRP8O43159 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RRP8O43159 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RRP8O43159 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RRP8O43159 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RRP8O43159 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RRP8O43159 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RRP8O43159 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RRP8O43159 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.98■□□□□ 0.63
RRP8O43159 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RRP8O43159 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RRP8O43159 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RRP8O43159 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RRP8O43159 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.97■□□□□ 0.63
RRP8O43159 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.97■□□□□ 0.63
RRP8O43159 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RRP8O43159 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RRP8O43159 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.97■□□□□ 0.63
RRP8O43159 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RRP8O43159 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
RRP8O43159 AC010947.1-201ENST00000623454 693 ntBASIC18.97■□□□□ 0.63
RRP8O43159 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RRP8O43159 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RRP8O43159 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RRP8O43159 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.97■□□□□ 0.63
RRP8O43159 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RRP8O43159 CYP2D8P-201ENST00000433633 1490 ntBASIC18.97■□□□□ 0.63
RRP8O43159 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RRP8O43159 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.96■□□□□ 0.63
RRP8O43159 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RRP8O43159 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
RRP8O43159 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RRP8O43159 UPK3BP1-201ENST00000428678 509 ntBASIC18.96■□□□□ 0.63
RRP8O43159 AL390955.1-201ENST00000428694 934 ntBASIC18.96■□□□□ 0.63
RRP8O43159 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.96■□□□□ 0.63
RRP8O43159 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
RRP8O43159 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.96■□□□□ 0.63
RRP8O43159 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RRP8O43159 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RRP8O43159 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RRP8O43159 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RRP8O43159 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RRP8O43159 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RRP8O43159 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RRP8O43159 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RRP8O43159 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RRP8O43159 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RRP8O43159 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RRP8O43159 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.95■□□□□ 0.62
RRP8O43159 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.95■□□□□ 0.62
RRP8O43159 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.95■□□□□ 0.62
RRP8O43159 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RRP8O43159 AL121906.2-201ENST00000621597 723 ntBASIC18.95■□□□□ 0.62
RRP8O43159 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RRP8O43159 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RRP8O43159 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RRP8O43159 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RRP8O43159 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RRP8O43159 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.94■□□□□ 0.62
RRP8O43159 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.94■□□□□ 0.62
RRP8O43159 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.94■□□□□ 0.62
RRP8O43159 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.94■□□□□ 0.62
RRP8O43159 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RRP8O43159 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RRP8O43159 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RRP8O43159 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RRP8O43159 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.94■□□□□ 0.62
RRP8O43159 TPM4P1-201ENST00000436100 807 ntBASIC18.94■□□□□ 0.62
RRP8O43159 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.94■□□□□ 0.62
RRP8O43159 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.94■□□□□ 0.62
RRP8O43159 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.94■□□□□ 0.62
RRP8O43159 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
RRP8O43159 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.94■□□□□ 0.62
RRP8O43159 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.94■□□□□ 0.62
RRP8O43159 WWOX-216ENST00000569818 525 ntBASIC18.94■□□□□ 0.62
RRP8O43159 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.94■□□□□ 0.62
RRP8O43159 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.94■□□□□ 0.62
RRP8O43159 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.94■□□□□ 0.62
RRP8O43159 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RRP8O43159 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.94■□□□□ 0.62
RRP8O43159 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RRP8O43159 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RRP8O43159 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RRP8O43159 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
RRP8O43159 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms