Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.2■□□□□ 0.18
SRRM4A7MD48 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.2■□□□□ 0.18
SRRM4A7MD48 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM4A7MD48 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SRRM4A7MD48 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.2■□□□□ 0.18
SRRM4A7MD48 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.2■□□□□ 0.18
SRRM4A7MD48 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SRRM4A7MD48 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM4A7MD48 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SRRM4A7MD48 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM4A7MD48 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM4A7MD48 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM4A7MD48 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM4A7MD48 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SRRM4A7MD48 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM4A7MD48 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM4A7MD48 AC100791.3-201ENST00000617619 330 ntBASIC16.2■□□□□ 0.18
SRRM4A7MD48 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM4A7MD48 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM4A7MD48 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM4A7MD48 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM4A7MD48 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM4A7MD48 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.2■□□□□ 0.18
SRRM4A7MD48 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM4A7MD48 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.2■□□□□ 0.18
SRRM4A7MD48 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM4A7MD48 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRRM4A7MD48 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM4A7MD48 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM4A7MD48 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
SRRM4A7MD48 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM4A7MD48 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.19■□□□□ 0.18
SRRM4A7MD48 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM4A7MD48 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SRRM4A7MD48 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.19■□□□□ 0.18
SRRM4A7MD48 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.19■□□□□ 0.18
SRRM4A7MD48 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM4A7MD48 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM4A7MD48 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM4A7MD48 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM4A7MD48 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.19■□□□□ 0.18
SRRM4A7MD48 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SRRM4A7MD48 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM4A7MD48 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM4A7MD48 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM4A7MD48 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM4A7MD48 MCRIP2P1-201ENST00000394346 511 ntBASIC16.19■□□□□ 0.18
SRRM4A7MD48 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.19■□□□□ 0.18
SRRM4A7MD48 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.19■□□□□ 0.18
SRRM4A7MD48 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.19■□□□□ 0.18
SRRM4A7MD48 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM4A7MD48 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.19■□□□□ 0.18
SRRM4A7MD48 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.19■□□□□ 0.18
SRRM4A7MD48 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SRRM4A7MD48 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.19■□□□□ 0.18
SRRM4A7MD48 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM4A7MD48 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SRRM4A7MD48 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SRRM4A7MD48 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM4A7MD48 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM4A7MD48 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRRM4A7MD48 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SRRM4A7MD48 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SRRM4A7MD48 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.18■□□□□ 0.18
SRRM4A7MD48 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRRM4A7MD48 BX119927.1-201ENST00000636596 1552 ntBASIC16.18■□□□□ 0.18
SRRM4A7MD48 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
SRRM4A7MD48 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRRM4A7MD48 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRRM4A7MD48 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRRM4A7MD48 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.18■□□□□ 0.18
SRRM4A7MD48 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRRM4A7MD48 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SRRM4A7MD48 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRRM4A7MD48 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRRM4A7MD48 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRRM4A7MD48 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.18■□□□□ 0.18
SRRM4A7MD48 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRRM4A7MD48 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRRM4A7MD48 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRRM4A7MD48 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.18■□□□□ 0.18
SRRM4A7MD48 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRRM4A7MD48 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM4A7MD48 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM4A7MD48 AC125437.2-201ENST00000625180 2167 ntBASIC16.17■□□□□ 0.18
SRRM4A7MD48 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM4A7MD48 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM4A7MD48 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.17■□□□□ 0.18
SRRM4A7MD48 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.17■□□□□ 0.18
SRRM4A7MD48 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.17■□□□□ 0.18
SRRM4A7MD48 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SRRM4A7MD48 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.17■□□□□ 0.18
SRRM4A7MD48 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM4A7MD48 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRRM4A7MD48 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.17■□□□□ 0.18
SRRM4A7MD48 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.17■□□□□ 0.18
SRRM4A7MD48 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.17■□□□□ 0.18
SRRM4A7MD48 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.17■□□□□ 0.18
SRRM4A7MD48 CYP2T1P-201ENST00000432607 1285 ntBASIC16.17■□□□□ 0.18
SRRM4A7MD48 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms