Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 EXOG-217ENST00000630638 197 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.12□□□□□ -0.15
TRAV12-1A0A0B4J245 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 AC090340.1-201ENST00000620778 4980 ntBASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-1A0A0B4J245 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 AC007613.1-201ENST00000572811 2597 ntBASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-1A0A0B4J245 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRAV12-1A0A0B4J245 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms