Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC9.65□□□□□ -0.86
COL15A1P39059 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
COL15A1P39059 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC9.65□□□□□ -0.86
COL15A1P39059 OR52N3P-201ENST00000413417 934 ntBASIC9.65□□□□□ -0.86
COL15A1P39059 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC9.65□□□□□ -0.86
COL15A1P39059 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC9.65□□□□□ -0.86
COL15A1P39059 AL356133.1-201ENST00000444762 372 ntBASIC9.65□□□□□ -0.86
COL15A1P39059 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
COL15A1P39059 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC9.65□□□□□ -0.86
COL15A1P39059 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
COL15A1P39059 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC9.65□□□□□ -0.86
COL15A1P39059 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC9.65□□□□□ -0.86
COL15A1P39059 AC233724.10-201ENST00000510454 409 ntBASIC9.65□□□□□ -0.86
COL15A1P39059 CFI-204ENST00000510800 667 ntTSL 2 BASIC9.65□□□□□ -0.86
COL15A1P39059 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC9.65□□□□□ -0.86
COL15A1P39059 OR5M4P-201ENST00000529436 925 ntBASIC9.65□□□□□ -0.86
COL15A1P39059 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
COL15A1P39059 PDCL3P1-201ENST00000534575 734 ntBASIC9.65□□□□□ -0.86
COL15A1P39059 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC9.65□□□□□ -0.86
COL15A1P39059 COX4I1P1-201ENST00000554239 509 ntBASIC9.65□□□□□ -0.86
COL15A1P39059 OR7E19P-202ENST00000589942 844 ntBASIC9.65□□□□□ -0.86
COL15A1P39059 RPS11-202ENST00000594493 575 ntTSL 3 BASIC9.65□□□□□ -0.86
COL15A1P39059 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC9.65□□□□□ -0.86
COL15A1P39059 MIAT_exon1.1-201ENST00000617016 135 ntBASIC9.65□□□□□ -0.86
COL15A1P39059 METAP1-212ENST00000625963 147 ntTSL 5 BASIC9.65□□□□□ -0.86
COL15A1P39059 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC9.65□□□□□ -0.86
COL15A1P39059 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC9.65□□□□□ -0.86
COL15A1P39059 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
COL15A1P39059 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
COL15A1P39059 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC9.65□□□□□ -0.86
COL15A1P39059 PITRM1-AS1-201ENST00000430356 3998 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
COL15A1P39059 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
COL15A1P39059 AC107398.3-201ENST00000562284 7000 ntBASIC9.65□□□□□ -0.86
COL15A1P39059 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
COL15A1P39059 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
COL15A1P39059 MAPK10-290ENST00000641237 2826 ntBASIC9.65□□□□□ -0.87
COL15A1P39059 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
COL15A1P39059 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC9.65□□□□□ -0.87
COL15A1P39059 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
COL15A1P39059 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
COL15A1P39059 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
COL15A1P39059 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
COL15A1P39059 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
COL15A1P39059 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
COL15A1P39059 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
COL15A1P39059 SSX6-201ENST00000376932 562 ntBASIC9.64□□□□□ -0.87
COL15A1P39059 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
COL15A1P39059 MIR555-201ENST00000384987 96 ntBASIC9.64□□□□□ -0.87
COL15A1P39059 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
COL15A1P39059 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC9.64□□□□□ -0.87
COL15A1P39059 AC008629.3-201ENST00000505786 586 ntBASIC9.64□□□□□ -0.87
COL15A1P39059 BTF3P1-201ENST00000522014 495 ntBASIC9.64□□□□□ -0.87
COL15A1P39059 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
COL15A1P39059 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC9.64□□□□□ -0.87
COL15A1P39059 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC9.64□□□□□ -0.87
COL15A1P39059 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC9.64□□□□□ -0.87
COL15A1P39059 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
COL15A1P39059 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
COL15A1P39059 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC9.64□□□□□ -0.87
COL15A1P39059 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC9.64□□□□□ -0.87
COL15A1P39059 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC9.64□□□□□ -0.87
COL15A1P39059 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
COL15A1P39059 SYNJ1-202ENST00000382491 6958 ntTSL 5 BASIC9.64□□□□□ -0.87
COL15A1P39059 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC9.64□□□□□ -0.87
COL15A1P39059 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
COL15A1P39059 AC004491.1-201ENST00000623029 1882 ntBASIC9.64□□□□□ -0.87
COL15A1P39059 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
COL15A1P39059 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
COL15A1P39059 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC9.64□□□□□ -0.87
COL15A1P39059 AC126474.2-201ENST00000623268 1750 ntBASIC9.64□□□□□ -0.87
COL15A1P39059 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
COL15A1P39059 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
COL15A1P39059 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
COL15A1P39059 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC9.64□□□□□ -0.87
COL15A1P39059 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
COL15A1P39059 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
COL15A1P39059 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC9.64□□□□□ -0.87
COL15A1P39059 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
COL15A1P39059 SF3A3P1-201ENST00000446317 1477 ntBASIC9.63□□□□□ -0.87
COL15A1P39059 AKR1C4-201ENST00000263126 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
COL15A1P39059 OLA1P1-201ENST00000396387 1189 ntBASIC9.63□□□□□ -0.87
COL15A1P39059 NUS1P4-201ENST00000401550 585 ntBASIC9.63□□□□□ -0.87
COL15A1P39059 RN7SKP207-201ENST00000411204 303 ntBASIC9.63□□□□□ -0.87
COL15A1P39059 CYP4F34P-201ENST00000425951 481 ntBASIC9.63□□□□□ -0.87
COL15A1P39059 VN1R35P-201ENST00000428102 693 ntBASIC9.63□□□□□ -0.87
COL15A1P39059 RBMY2EP-202ENST00000456360 940 ntBASIC9.63□□□□□ -0.87
COL15A1P39059 AC008799.2-201ENST00000484429 647 ntBASIC9.63□□□□□ -0.87
COL15A1P39059 AC025271.1-201ENST00000485045 429 ntBASIC9.63□□□□□ -0.87
COL15A1P39059 RPL7L1P7-201ENST00000509986 724 ntBASIC9.63□□□□□ -0.87
COL15A1P39059 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC9.63□□□□□ -0.87
COL15A1P39059 TUBD1-206ENST00000539018 1027 ntTSL 2 BASIC9.63□□□□□ -0.87
COL15A1P39059 AC093334.1-201ENST00000559904 423 ntTSL 3 BASIC9.63□□□□□ -0.87
COL15A1P39059 AC126323.4-201ENST00000566935 234 ntBASIC9.63□□□□□ -0.87
COL15A1P39059 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC9.63□□□□□ -0.87
COL15A1P39059 FCGR1CP-201ENST00000579737 1127 ntBASIC9.63□□□□□ -0.87
COL15A1P39059 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC9.63□□□□□ -0.87
COL15A1P39059 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC9.63□□□□□ -0.87
COL15A1P39059 CUX2P1-201ENST00000606426 298 ntBASIC9.63□□□□□ -0.87
COL15A1P39059 AL391903.2-201ENST00000614532 247 ntBASIC9.63□□□□□ -0.87
COL15A1P39059 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC9.63□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms