RNA–Protein interactions for RNA: ENST00000534575.1

PDCL3P1-201, Transcript of phosducin-like 3 pseudogene 1, humanhuman

BASIC

Gene PDCL3P1, Length 734 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3P1-201ENST00000534575 AEBP2Q6ZN18 517 aaPredicted RBP20.85■□□□□ 0.93
PDCL3P1-201ENST00000534575 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
PDCL3P1-201ENST00000534575 PHF23Q9BUL5 403 aaPredicted RBP18.05■□□□□ 0.48
PDCL3P1-201ENST00000534575 NISCHQ9Y2I1 1504 aa17.98■□□□□ 0.47
PDCL3P1-201ENST00000534575 SENP3Q9H4L4 574 aaPredicted RBP17.56■□□□□ 0.4
PDCL3P1-201ENST00000534575 PLPPR3Q6T4P5 718 aa16.63■□□□□ 0.25
PDCL3P1-201ENST00000534575 FOXD1Q16676 465 aa16.37■□□□□ 0.21
PDCL3P1-201ENST00000534575 CCDC180Q9P1Z9 1646 aa16.22■□□□□ 0.19
PDCL3P1-201ENST00000534575 ABCC9O60706 1549 aa16.04■□□□□ 0.16
PDCL3P1-201ENST00000534575 ADRA2BP18089 450 aa15.92■□□□□ 0.14
PDCL3P1-201ENST00000534575 PPP6R1Q9UPN7 881 aa15.9■□□□□ 0.14
PDCL3P1-201ENST00000534575 PIAS4Q8N2W9 510 aaPredicted RBP15.48■□□□□ 0.07
PDCL3P1-201ENST00000534575 RB1CC1Q8TDY2 1594 aa15.36■□□□□ 0.05
PDCL3P1-201ENST00000534575 NACADO15069 1562 aa15.26■□□□□ 0.03
PDCL3P1-201ENST00000534575 UNC13AQ9UPW8 1703 aa15.11■□□□□ 0.01
PDCL3P1-201ENST00000534575 MYO15BQ96JP2 1530 aa15.07■□□□□ 0
PDCL3P1-201ENST00000534575 DCAF8L2P0C7V8 631 aa15.05■□□□□ -0
PDCL3P1-201ENST00000534575 MSH5O43196 834 aa14.94□□□□□ -0.02
PDCL3P1-201ENST00000534575 DNAJC5BQ9UF47 199 aa14.93□□□□□ -0.02
PDCL3P1-201ENST00000534575 ZCCHC6Q5VYS8 1495 aaKnown RBP14.92□□□□□ -0.02
PDCL3P1-201ENST00000534575 DCAF1Q9Y4B6 1507 aa14.89□□□□□ -0.03
PDCL3P1-201ENST00000534575 BICRAQ9NZM4 1560 aa14.89□□□□□ -0.03
PDCL3P1-201ENST00000534575 PABPN1Q86U42 306 aaKnown RBP eCLIP14.87□□□□□ -0.03
PDCL3P1-201ENST00000534575 SHROOM4Q9ULL8 1493 aa14.74□□□□□ -0.05
PDCL3P1-201ENST00000534575 PPP4R3CPQ6ZMV5 832 aa14.73□□□□□ -0.05
PDCL3P1-201ENST00000534575 SCRIBQ14160 1630 aa14.7□□□□□ -0.06
PDCL3P1-201ENST00000534575 KCNA4P22459 653 aa14.59□□□□□ -0.07
PDCL3P1-201ENST00000534575 CC2D2AQ9P2K1 1620 aa14.55□□□□□ -0.08
PDCL3P1-201ENST00000534575 EIF4G1Q04637 1599 aaKnown RBP14.52□□□□□ -0.08
PDCL3P1-201ENST00000534575 CECR2Q9BXF3 1484 aa14.45□□□□□ -0.1
PDCL3P1-201ENST00000534575 MAPK8IP2Q13387 824 aaPredicted RBP14.43□□□□□ -0.1
PDCL3P1-201ENST00000534575 POTEDQ86YR6 584 aa14.42□□□□□ -0.1
PDCL3P1-201ENST00000534575 SCAF1Q9H7N4 1312 aaKnown RBP14.41□□□□□ -0.1
PDCL3P1-201ENST00000534575 NCBP3Q53F19 620 aaKnown RBP14.31□□□□□ -0.12
PDCL3P1-201ENST00000534575 CNKSR2Q8WXI2 1034 aa14.23□□□□□ -0.13
PDCL3P1-201ENST00000534575 NPM3O75607 178 aaKnown RBP14.18□□□□□ -0.14
PDCL3P1-201ENST00000534575 SMARCA4P51532 1647 aa14.05□□□□□ -0.16
PDCL3P1-201ENST00000534575 DMRT2Q9Y5R5 561 aa14.05□□□□□ -0.16
PDCL3P1-201ENST00000534575 NCAPD3P42695 1498 aa14.04□□□□□ -0.16
PDCL3P1-201ENST00000534575 SMARCA2P51531 1590 aa14.01□□□□□ -0.17
PDCL3P1-201ENST00000534575 ATAD2BQ9ULI0 1458 aa14□□□□□ -0.17
PDCL3P1-201ENST00000534575 HMGXB3Q12766 1538 aa14□□□□□ -0.17
PDCL3P1-201ENST00000534575 BAZ1AQ9NRL2 1556 aaPredicted RBP13.99□□□□□ -0.17
PDCL3P1-201ENST00000534575 PEG3Q9GZU2 1588 aa13.92□□□□□ -0.18
PDCL3P1-201ENST00000534575 RNF216Q9NWF9 866 aaPredicted RBP13.9□□□□□ -0.18
PDCL3P1-201ENST00000534575 BAZ1BQ9UIG0 1483 aaKnown RBP13.89□□□□□ -0.19
PDCL3P1-201ENST00000534575 SLC4A1APQ9BWU0 796 aaKnown RBP13.89□□□□□ -0.19
PDCL3P1-201ENST00000534575 ERCC6Q03468 1493 aa13.87□□□□□ -0.19
PDCL3P1-201ENST00000534575 CUX2O14529 1486 aa13.85□□□□□ -0.19
PDCL3P1-201ENST00000534575 MROH2BQ7Z745 1585 aa13.83□□□□□ -0.19
PDCL3P1-201ENST00000534575 HOXD11P31277 338 aaPredicted RBP13.8□□□□□ -0.2
PDCL3P1-201ENST00000534575 NESP48681 1621 aa13.79□□□□□ -0.2
PDCL3P1-201ENST00000534575 EHMT2Q96KQ7 1210 aa13.77□□□□□ -0.21
PDCL3P1-201ENST00000534575 LAMC3Q9Y6N6 1575 aa13.77□□□□□ -0.21
PDCL3P1-201ENST00000534575 WIZO95785 1651 aa13.72□□□□□ -0.21
PDCL3P1-201ENST00000534575 KIF21AQ7Z4S6 1674 aa13.72□□□□□ -0.21
PDCL3P1-201ENST00000534575 THOC2Q8NI27 1593 aaKnown RBP13.71□□□□□ -0.21
PDCL3P1-201ENST00000534575 DNAJC5Q9H3Z4 198 aa13.71□□□□□ -0.21
PDCL3P1-201ENST00000534575 PDS5BQ9NTI5 1447 aa13.64□□□□□ -0.23
PDCL3P1-201ENST00000534575 CADPSQ9ULU8 1353 aa13.6□□□□□ -0.23
PDCL3P1-201ENST00000534575 DCAF8L1A6NGE4 600 aa13.59□□□□□ -0.23
PDCL3P1-201ENST00000534575 RSF1Q96T23 1441 aaPredicted RBP13.55□□□□□ -0.24
PDCL3P1-201ENST00000534575 TOP2AP11388 1531 aaKnown RBP13.54□□□□□ -0.24
PDCL3P1-201ENST00000534575 MRC2Q9UBG0 1479 aa13.53□□□□□ -0.24
PDCL3P1-201ENST00000534575 WDR62O43379 1518 aa13.52□□□□□ -0.25
PDCL3P1-201ENST00000534575 PRDM2Q13029 1718 aa13.52□□□□□ -0.25
PDCL3P1-201ENST00000534575 CEP164Q9UPV0 1460 aa13.49□□□□□ -0.25
PDCL3P1-201ENST00000534575 CFTRP13569 1480 aa13.48□□□□□ -0.25
PDCL3P1-201ENST00000534575 FANCD2Q9BXW9 1451 aa13.47□□□□□ -0.25
PDCL3P1-201ENST00000534575 CSRNP3Q8WYN3 585 aa13.45□□□□□ -0.26
PDCL3P1-201ENST00000534575 ZBTB22O15209 634 aa13.44□□□□□ -0.26
PDCL3P1-201ENST00000534575 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
PDCL3P1-201ENST00000534575 URB2Q14146 1524 aaKnown RBP13.35□□□□□ -0.27
PDCL3P1-201ENST00000534575 CCDC88BA6NC98 1476 aa13.34□□□□□ -0.27
PDCL3P1-201ENST00000534575 FOXD4L1Q9NU39 408 aa13.32□□□□□ -0.28
PDCL3P1-201ENST00000534575 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.24□□□□□ -0.29
PDCL3P1-201ENST00000534575 TOPBP1Q92547 1522 aa13.23□□□□□ -0.29
PDCL3P1-201ENST00000534575 ABCC8Q09428 1581 aa13.22□□□□□ -0.29
PDCL3P1-201ENST00000534575 DNMBPQ6XZF7 1577 aa13.21□□□□□ -0.29
PDCL3P1-201ENST00000534575 IFT140Q96RY7 1462 aa13.21□□□□□ -0.3
PDCL3P1-201ENST00000534575 EIF4G3O43432 1585 aaKnown RBP13.16□□□□□ -0.3
PDCL3P1-201ENST00000534575 OSCARQ8IYS5 282 aa13.16□□□□□ -0.3
PDCL3P1-201ENST00000534575 ZNF608Q9ULD9 1512 aaPredicted RBP13.16□□□□□ -0.3
PDCL3P1-201ENST00000534575 TARBP1Q13395 1621 aaKnown RBP13.13□□□□□ -0.31
PDCL3P1-201ENST00000534575 TRIM41Q8WV44 630 aa13.11□□□□□ -0.31
PDCL3P1-201ENST00000534575 CHD1O14646 1710 aa13.1□□□□□ -0.31
PDCL3P1-201ENST00000534575 POLA1P09884 1462 aaPredicted RBP13.09□□□□□ -0.31
PDCL3P1-201ENST00000534575 RIMBP3CA6NJZ7 1639 aa13.06□□□□□ -0.32
PDCL3P1-201ENST00000534575 RIMBP3BA6NNM3 1639 aa13.06□□□□□ -0.32
PDCL3P1-201ENST00000534575 RIMBP3Q9UFD9 1639 aa13.06□□□□□ -0.32
PDCL3P1-201ENST00000534575 MYCNP04198 464 aaPredicted RBP13.05□□□□□ -0.32
PDCL3P1-201ENST00000534575 WDR97A6NE52 1622 aa13.05□□□□□ -0.32
PDCL3P1-201ENST00000534575 AQRO60306 1485 aaKnown RBP eCLIP13.04□□□□□ -0.32
PDCL3P1-201ENST00000534575 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
PDCL3P1-201ENST00000534575 FGD5Q6ZNL6 1462 aa13.01□□□□□ -0.33
PDCL3P1-201ENST00000534575 ARHGEF11O15085 1522 aa13.01□□□□□ -0.33
PDCL3P1-201ENST00000534575 CUX1P39880 1505 aa13.01□□□□□ -0.33
PDCL3P1-201ENST00000534575 RAD54L2Q9Y4B4 1467 aa13□□□□□ -0.33
PDCL3P1-201ENST00000534575 SOGA1O94964 1423 aa13□□□□□ -0.33
PDCL3P1-201ENST00000534575 PBRM1Q86U86 1689 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms