RNA–Protein interactions for RNA: ENST00000398339.5

TCF4-203, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-203ENST00000398339 NISCHQ9Y2I1 1504 aa16.24■□□□□ 0.19
TCF4-203ENST00000398339 SHROOM4Q9ULL8 1493 aa14.07□□□□□ -0.16
TCF4-203ENST00000398339 SUPT5HO00267 1087 aaKnown RBP13.94□□□□□ -0.18
TCF4-203ENST00000398339 PELP1Q8IZL8 1130 aaKnown RBP13.94□□□□□ -0.18
TCF4-203ENST00000398339 HRCP23327 699 aa13.83□□□□□ -0.2
TCF4-203ENST00000398339 ZCCHC6Q5VYS8 1495 aaKnown RBP13.81□□□□□ -0.2
TCF4-203ENST00000398339 MYT1Q01538 1121 aa13.76□□□□□ -0.21
TCF4-203ENST00000398339 MYO15BQ96JP2 1530 aa13.75□□□□□ -0.21
TCF4-203ENST00000398339 CHIC1Q5VXU3 224 aa13.72□□□□□ -0.21
TCF4-203ENST00000398339 CCDC180Q9P1Z9 1646 aa13.64□□□□□ -0.23
TCF4-203ENST00000398339 PCGF6Q9BYE7 350 aa13.59□□□□□ -0.23
TCF4-203ENST00000398339 PPARGC1BQ86YN6 1023 aaKnown RBP13.48□□□□□ -0.25
TCF4-203ENST00000398339 DCAF1Q9Y4B6 1507 aa13.48□□□□□ -0.25
TCF4-203ENST00000398339 DCAF8L2P0C7V8 631 aa13.37□□□□□ -0.27
TCF4-203ENST00000398339 LOC105371045A0A1W2PR82 267 aa13.32□□□□□ -0.28
TCF4-203ENST00000398339 TTBK1Q5TCY1 1321 aaPredicted RBP13.31□□□□□ -0.28
TCF4-203ENST00000398339 TRIM26Q12899 539 aaPredicted RBP13.27□□□□□ -0.28
TCF4-203ENST00000398339 ZEB1P37275 1124 aaPredicted RBP13.13□□□□□ -0.31
TCF4-203ENST00000398339 PRKCSHP14314 528 aaPredicted RBP13.09□□□□□ -0.31
TCF4-203ENST00000398339 ABCC9O60706 1549 aa13.08□□□□□ -0.32
TCF4-203ENST00000398339 RSF1Q96T23 1441 aaPredicted RBP12.99□□□□□ -0.33
TCF4-203ENST00000398339 TRIM41Q8WV44 630 aa12.97□□□□□ -0.33
TCF4-203ENST00000398339 SCAF1Q9H7N4 1312 aaKnown RBP12.93□□□□□ -0.34
TCF4-203ENST00000398339 RB1CC1Q8TDY2 1594 aa12.88□□□□□ -0.35
TCF4-203ENST00000398339 FAM9AQ8IZU1 332 aaPredicted RBP12.87□□□□□ -0.35
TCF4-203ENST00000398339 SCRIBQ14160 1630 aa12.86□□□□□ -0.35
TCF4-203ENST00000398339 SLC24A1O60721 1099 aa12.85□□□□□ -0.35
TCF4-203ENST00000398339 APLP2Q06481 763 aa12.8□□□□□ -0.36
TCF4-203ENST00000398339 ERICH6Q7L0X2 663 aa12.76□□□□□ -0.37
TCF4-203ENST00000398339 EHMT2Q96KQ7 1210 aa12.75□□□□□ -0.37
TCF4-203ENST00000398339 ACIN1Q9UKV3 1341 aaKnown RBP12.71□□□□□ -0.38
TCF4-203ENST00000398339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.68□□□□□ -0.38
TCF4-203ENST00000398339 CCER1Q8TC90 406 aaPredicted RBP12.66□□□□□ -0.38
TCF4-203ENST00000398339 CECR2Q9BXF3 1484 aa12.66□□□□□ -0.38
TCF4-203ENST00000398339 NEUROD1Q13562 356 aa12.66□□□□□ -0.38
TCF4-203ENST00000398339 MROH2BQ7Z745 1585 aa12.65□□□□□ -0.38
TCF4-203ENST00000398339 BCL11AQ9H165 835 aa12.65□□□□□ -0.39
TCF4-203ENST00000398339 DIEXFQ68CQ4 756 aaKnown RBP12.59□□□□□ -0.39
TCF4-203ENST00000398339 WIZO95785 1651 aa12.58□□□□□ -0.39
TCF4-203ENST00000398339 CENPBP07199 599 aaPredicted RBP12.58□□□□□ -0.4
TCF4-203ENST00000398339 EIF4G1Q04637 1599 aaKnown RBP12.57□□□□□ -0.4
TCF4-203ENST00000398339 GTF3C3Q9Y5Q9 886 aa12.56□□□□□ -0.4
TCF4-203ENST00000398339 NACADO15069 1562 aa12.55□□□□□ -0.4
TCF4-203ENST00000398339 WRNQ14191 1432 aaPredicted RBP eCLIP12.55□□□□□ -0.4
TCF4-203ENST00000398339 BAZ1AQ9NRL2 1556 aaPredicted RBP12.54□□□□□ -0.4
TCF4-203ENST00000398339 CEP162Q5TB80 1403 aa12.47□□□□□ -0.41
TCF4-203ENST00000398339 CCDC88BA6NC98 1476 aa12.44□□□□□ -0.42
TCF4-203ENST00000398339 TNIKQ9UKE5 1360 aa12.43□□□□□ -0.42
TCF4-203ENST00000398339 ZNF316A6NFI3 1004 aaPredicted RBP12.43□□□□□ -0.42
TCF4-203ENST00000398339 ABCC8Q09428 1581 aa12.42□□□□□ -0.42
TCF4-203ENST00000398339 AEBP2Q6ZN18 517 aaPredicted RBP12.41□□□□□ -0.42
TCF4-203ENST00000398339 TOP2AP11388 1531 aaKnown RBP12.4□□□□□ -0.42
TCF4-203ENST00000398339 SOGA1O94964 1423 aa12.38□□□□□ -0.43
TCF4-203ENST00000398339 EEA1Q15075 1411 aa12.36□□□□□ -0.43
TCF4-203ENST00000398339 SMARCA2P51531 1590 aa12.34□□□□□ -0.43
TCF4-203ENST00000398339 CSRNP3Q8WYN3 585 aa12.33□□□□□ -0.43
TCF4-203ENST00000398339 UBTFP17480 764 aaKnown RBP12.3□□□□□ -0.44
TCF4-203ENST00000398339 YTHDC1Q96MU7 727 aaKnown RBP12.3□□□□□ -0.44
TCF4-203ENST00000398339 SMARCA4P51532 1647 aa12.3□□□□□ -0.44
TCF4-203ENST00000398339 RUSC2Q8N2Y8 1516 aa12.3□□□□□ -0.44
TCF4-203ENST00000398339 GOLGA3Q08378 1498 aa12.3□□□□□ -0.44
TCF4-203ENST00000398339 DAXXQ9UER7 740 aaPredicted RBP12.29□□□□□ -0.44
TCF4-203ENST00000398339 MIER1Q8N108 512 aa12.28□□□□□ -0.44
TCF4-203ENST00000398339 HNRNPUL2Q1KMD3 747 aaKnown RBP12.22□□□□□ -0.45
TCF4-203ENST00000398339 CEP164Q9UPV0 1460 aa12.19□□□□□ -0.46
TCF4-203ENST00000398339 KIF21BO75037 1637 aa12.18□□□□□ -0.46
TCF4-203ENST00000398339 CLIP1P30622 1438 aa12.17□□□□□ -0.46
TCF4-203ENST00000398339 VPS8Q8N3P4 1428 aa12.16□□□□□ -0.46
TCF4-203ENST00000398339 SYNJ1O43426 1573 aa12.11□□□□□ -0.47
TCF4-203ENST00000398339 BAZ1BQ9UIG0 1483 aaKnown RBP12.11□□□□□ -0.47
TCF4-203ENST00000398339 CLSPNQ9HAW4 1339 aa12.1□□□□□ -0.47
TCF4-203ENST00000398339 UNC13AQ9UPW8 1703 aa12.09□□□□□ -0.47
TCF4-203ENST00000398339 RAPGEF2Q9Y4G8 1499 aa12.06□□□□□ -0.48
TCF4-203ENST00000398339 DNAJC5BQ9UF47 199 aa12.05□□□□□ -0.48
TCF4-203ENST00000398339 PEG3Q9GZU2 1588 aa12.05□□□□□ -0.48
TCF4-203ENST00000398339 DHX57Q6P158 1386 aaKnown RBP12.04□□□□□ -0.48
TCF4-203ENST00000398339 EIF5BO60841 1220 aaKnown RBP12.03□□□□□ -0.48
TCF4-203ENST00000398339 SUPT16HQ9Y5B9 1047 aaKnown RBP12.03□□□□□ -0.48
TCF4-203ENST00000398339 RANGAP1P46060 587 aaPredicted RBP11.97□□□□□ -0.49
TCF4-203ENST00000398339 BICRAQ9NZM4 1560 aa11.96□□□□□ -0.5
TCF4-203ENST00000398339 ARAP1Q96P48 1450 aa11.94□□□□□ -0.5
TCF4-203ENST00000398339 PABPN1Q86U42 306 aaKnown RBP eCLIP11.94□□□□□ -0.5
TCF4-203ENST00000398339 TSHZ2Q9NRE2 1034 aa11.93□□□□□ -0.5
TCF4-203ENST00000398339 TOP2BQ02880 1626 aa11.93□□□□□ -0.5
TCF4-203ENST00000398339 ERICH3Q5RHP9 1530 aa11.93□□□□□ -0.5
TCF4-203ENST00000398339 RRBP1Q9P2E9 1410 aaKnown RBP11.93□□□□□ -0.5
TCF4-203ENST00000398339 ATAD2BQ9ULI0 1458 aa11.92□□□□□ -0.5
TCF4-203ENST00000398339 KANK4Q5T7N3 995 aaPredicted RBP11.92□□□□□ -0.5
TCF4-203ENST00000398339 CUX2O14529 1486 aa11.92□□□□□ -0.5
TCF4-203ENST00000398339 PRXQ9BXM0 1461 aa11.91□□□□□ -0.5
TCF4-203ENST00000398339 ANP32EQ9BTT0 268 aa11.89□□□□□ -0.51
TCF4-203ENST00000398339 BIVM-ERCC5R4GMW8 1640 aa11.88□□□□□ -0.51
TCF4-203ENST00000398339 CCNB3Q8WWL7 1395 aa11.85□□□□□ -0.51
TCF4-203ENST00000398339 KCNH8Q96L42 1107 aa11.82□□□□□ -0.52
TCF4-203ENST00000398339 MAPKBP1O60336 1514 aa11.8□□□□□ -0.52
TCF4-203ENST00000398339 PLEKHG5O94827 1062 aa11.79□□□□□ -0.52
TCF4-203ENST00000398339 RAB3GAP2Q9H2M9 1393 aa11.79□□□□□ -0.52
TCF4-203ENST00000398339 ARHGAP35Q9NRY4 1499 aa11.78□□□□□ -0.52
TCF4-203ENST00000398339 KIF27Q86VH2 1401 aa11.78□□□□□ -0.52
TCF4-203ENST00000398339 ITGAEP38570 1179 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 188.4 ms