RNA–Protein interactions for RNA: ENST00000519189.1

LINC01288-201, Transcript of long intergenic non-protein coding RNA 1288, humanhuman

TSL 4 BASIC

Gene LINC01288, Length 529 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01288-201ENST00000519189 AEBP2Q6ZN18 517 aaPredicted RBP23.57■■□□□ 1.36
LINC01288-201ENST00000519189 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
LINC01288-201ENST00000519189 PHF23Q9BUL5 403 aaPredicted RBP20.6■□□□□ 0.89
LINC01288-201ENST00000519189 SENP3Q9H4L4 574 aaPredicted RBP19.95■□□□□ 0.78
LINC01288-201ENST00000519189 PLPPR3Q6T4P5 718 aa19.15■□□□□ 0.66
LINC01288-201ENST00000519189 FOXD1Q16676 465 aa18.46■□□□□ 0.55
LINC01288-201ENST00000519189 PPP6R1Q9UPN7 881 aa18.04■□□□□ 0.48
LINC01288-201ENST00000519189 ADRA2BP18089 450 aa18.03■□□□□ 0.48
LINC01288-201ENST00000519189 NISCHQ9Y2I1 1504 aa17.81■□□□□ 0.44
LINC01288-201ENST00000519189 PIAS4Q8N2W9 510 aaPredicted RBP17.48■□□□□ 0.39
LINC01288-201ENST00000519189 KCNA4P22459 653 aa16.93■□□□□ 0.3
LINC01288-201ENST00000519189 PPP4R3CPQ6ZMV5 832 aa16.91■□□□□ 0.3
LINC01288-201ENST00000519189 MSH5O43196 834 aa16.89■□□□□ 0.29
LINC01288-201ENST00000519189 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
LINC01288-201ENST00000519189 SCAF1Q9H7N4 1312 aaKnown RBP16.51■□□□□ 0.23
LINC01288-201ENST00000519189 CNKSR2Q8WXI2 1034 aa16.37■□□□□ 0.21
LINC01288-201ENST00000519189 NPM3O75607 178 aaKnown RBP16.34■□□□□ 0.21
LINC01288-201ENST00000519189 MAPK8IP2Q13387 824 aaPredicted RBP16.23■□□□□ 0.19
LINC01288-201ENST00000519189 SLC4A1APQ9BWU0 796 aaKnown RBP16.18■□□□□ 0.18
LINC01288-201ENST00000519189 EHMT2Q96KQ7 1210 aa16.09■□□□□ 0.17
LINC01288-201ENST00000519189 DMRT2Q9Y5R5 561 aa16■□□□□ 0.15
LINC01288-201ENST00000519189 RNF216Q9NWF9 866 aaPredicted RBP15.97■□□□□ 0.15
LINC01288-201ENST00000519189 DNAJC5BQ9UF47 199 aa15.91■□□□□ 0.14
LINC01288-201ENST00000519189 HOXD11P31277 338 aaPredicted RBP15.82■□□□□ 0.12
LINC01288-201ENST00000519189 CSRNP3Q8WYN3 585 aa15.8■□□□□ 0.12
LINC01288-201ENST00000519189 CCDC180Q9P1Z9 1646 aa15.69■□□□□ 0.1
LINC01288-201ENST00000519189 ZBTB22O15209 634 aa15.59■□□□□ 0.09
LINC01288-201ENST00000519189 FOXD4L1Q9NU39 408 aa15.49■□□□□ 0.07
LINC01288-201ENST00000519189 ABCC9O60706 1549 aa15.44■□□□□ 0.06
LINC01288-201ENST00000519189 SLC4A2P04920 1241 aa15.34■□□□□ 0.05
LINC01288-201ENST00000519189 DCAF8L1A6NGE4 600 aa15.18■□□□□ 0.02
LINC01288-201ENST00000519189 MYCNP04198 464 aaPredicted RBP15.1■□□□□ 0.01
LINC01288-201ENST00000519189 DCAF8L2P0C7V8 631 aa15.07■□□□□ 0
LINC01288-201ENST00000519189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.01□□□□□ -0.01
LINC01288-201ENST00000519189 ATXN8OSP0DMR3 200 aa14.95□□□□□ -0.02
LINC01288-201ENST00000519189 U3KPZ7 1027 aaPredicted RBP14.85□□□□□ -0.03
LINC01288-201ENST00000519189 ZCCHC6Q5VYS8 1495 aaKnown RBP14.82□□□□□ -0.04
LINC01288-201ENST00000519189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.79□□□□□ -0.04
LINC01288-201ENST00000519189 HNRNPUL2Q1KMD3 747 aaKnown RBP14.79□□□□□ -0.04
LINC01288-201ENST00000519189 NACADO15069 1562 aa14.78□□□□□ -0.04
LINC01288-201ENST00000519189 RB1CC1Q8TDY2 1594 aa14.78□□□□□ -0.04
LINC01288-201ENST00000519189 SAMD1Q6SPF0 538 aaPredicted RBP14.75□□□□□ -0.05
LINC01288-201ENST00000519189 POTEDQ86YR6 584 aa14.72□□□□□ -0.05
LINC01288-201ENST00000519189 MYO15BQ96JP2 1530 aa14.66□□□□□ -0.06
LINC01288-201ENST00000519189 DCAF1Q9Y4B6 1507 aa14.66□□□□□ -0.06
LINC01288-201ENST00000519189 ATF5Q9Y2D1 282 aaPredicted RBP14.64□□□□□ -0.07
LINC01288-201ENST00000519189 APLP2Q06481 763 aa14.55□□□□□ -0.08
LINC01288-201ENST00000519189 PABPN1Q86U42 306 aaKnown RBP eCLIP14.54□□□□□ -0.08
LINC01288-201ENST00000519189 RNF39Q9H2S5 420 aa14.52□□□□□ -0.09
LINC01288-201ENST00000519189 UNC13AQ9UPW8 1703 aa14.47□□□□□ -0.09
LINC01288-201ENST00000519189 SCRIBQ14160 1630 aa14.45□□□□□ -0.1
LINC01288-201ENST00000519189 ZNF219Q9P2Y4 722 aaPredicted RBP14.38□□□□□ -0.11
LINC01288-201ENST00000519189 BICRAQ9NZM4 1560 aa14.37□□□□□ -0.11
LINC01288-201ENST00000519189 C1QBPQ07021 282 aaKnown RBP14.36□□□□□ -0.11
LINC01288-201ENST00000519189 SPINK5Q9NQ38 1064 aaPredicted RBP14.3□□□□□ -0.12
LINC01288-201ENST00000519189 SHROOM4Q9ULL8 1493 aa14.3□□□□□ -0.12
LINC01288-201ENST00000519189 FKBP8Q14318 412 aa14.23□□□□□ -0.13
LINC01288-201ENST00000519189 TRHP20396 242 aaPredicted RBP14.22□□□□□ -0.13
LINC01288-201ENST00000519189 CAPN15O75808 1086 aa14.2□□□□□ -0.14
LINC01288-201ENST00000519189 POLA2Q14181 598 aa14.09□□□□□ -0.15
LINC01288-201ENST00000519189 MKRN4PQ13434 485 aaPredicted RBP14.04□□□□□ -0.16
LINC01288-201ENST00000519189 FBLN2P98095 1184 aa14□□□□□ -0.17
LINC01288-201ENST00000519189 EIF4G1Q04637 1599 aaKnown RBP13.97□□□□□ -0.17
LINC01288-201ENST00000519189 ABCB7O75027 752 aa13.97□□□□□ -0.17
LINC01288-201ENST00000519189 ZBTB12Q9Y330 459 aaPredicted RBP13.94□□□□□ -0.18
LINC01288-201ENST00000519189 CECR2Q9BXF3 1484 aa13.93□□□□□ -0.18
LINC01288-201ENST00000519189 DSG3P32926 999 aa13.93□□□□□ -0.18
LINC01288-201ENST00000519189 CC2D2AQ9P2K1 1620 aa13.91□□□□□ -0.18
LINC01288-201ENST00000519189 SPDYE4A6NLX3 237 aa13.88□□□□□ -0.19
LINC01288-201ENST00000519189 CACNB1Q02641 598 aaPredicted RBP13.82□□□□□ -0.2
LINC01288-201ENST00000519189 SMARCA4P51532 1647 aa13.79□□□□□ -0.2
LINC01288-201ENST00000519189 PROM2Q8N271 834 aa13.78□□□□□ -0.2
LINC01288-201ENST00000519189 MROH2BQ7Z745 1585 aa13.77□□□□□ -0.21
LINC01288-201ENST00000519189 BAZ1AQ9NRL2 1556 aaPredicted RBP13.76□□□□□ -0.21
LINC01288-201ENST00000519189 ATAD2BQ9ULI0 1458 aa13.72□□□□□ -0.21
LINC01288-201ENST00000519189 NCAPD3P42695 1498 aa13.67□□□□□ -0.22
LINC01288-201ENST00000519189 RSF1Q96T23 1441 aaPredicted RBP13.65□□□□□ -0.22
LINC01288-201ENST00000519189 AMER1Q5JTC6 1135 aaPredicted RBP13.65□□□□□ -0.22
LINC01288-201ENST00000519189 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
LINC01288-201ENST00000519189 SMARCA2P51531 1590 aa13.65□□□□□ -0.22
LINC01288-201ENST00000519189 WIZO95785 1651 aa13.63□□□□□ -0.23
LINC01288-201ENST00000519189 OSCARQ8IYS5 282 aa13.61□□□□□ -0.23
LINC01288-201ENST00000519189 BAZ1BQ9UIG0 1483 aaKnown RBP13.61□□□□□ -0.23
LINC01288-201ENST00000519189 PEG3Q9GZU2 1588 aa13.59□□□□□ -0.23
LINC01288-201ENST00000519189 SPDYE2BA6NHP3 402 aa13.59□□□□□ -0.23
LINC01288-201ENST00000519189 SPDYE6P0CI01 402 aa13.59□□□□□ -0.23
LINC01288-201ENST00000519189 SPDYE2Q495Y8 402 aa13.59□□□□□ -0.23
LINC01288-201ENST00000519189 RTN4Q9NQC3 1192 aaKnown RBP13.59□□□□□ -0.23
LINC01288-201ENST00000519189 HMGXB3Q12766 1538 aa13.55□□□□□ -0.24
LINC01288-201ENST00000519189 ZNF692Q9BU19 519 aaPredicted RBP13.55□□□□□ -0.24
LINC01288-201ENST00000519189 SSUH2Q9Y2M2 353 aa13.54□□□□□ -0.24
LINC01288-201ENST00000519189 SUPT5HO00267 1087 aaKnown RBP13.52□□□□□ -0.25
LINC01288-201ENST00000519189 VASPP50552 380 aaPredicted RBP13.46□□□□□ -0.25
LINC01288-201ENST00000519189 TOP2AP11388 1531 aaKnown RBP13.42□□□□□ -0.26
LINC01288-201ENST00000519189 NESP48681 1621 aa13.39□□□□□ -0.27
LINC01288-201ENST00000519189 CCDC88BA6NC98 1476 aa13.35□□□□□ -0.27
LINC01288-201ENST00000519189 CADPSQ9ULU8 1353 aa13.32□□□□□ -0.28
LINC01288-201ENST00000519189 STAG3Q9UJ98 1225 aa13.31□□□□□ -0.28
LINC01288-201ENST00000519189 IFNLR1Q8IU57 520 aaPredicted RBP13.29□□□□□ -0.28
LINC01288-201ENST00000519189 RBM42Q9BTD8 480 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms