RNA–Protein interactions for RNA: ENST00000323180.10

PHF21A-201, Transcript of PHD finger protein 21A, humanhuman

TSL 1 (best) BASIC

Gene PHF21A, Length 3,675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF21A-201ENST00000323180 NISCHQ9Y2I1 1504 aa15.99■□□□□ 0.15
PHF21A-201ENST00000323180 HRCP23327 699 aa14.09□□□□□ -0.15
PHF21A-201ENST00000323180 SHROOM4Q9ULL8 1493 aa14.07□□□□□ -0.16
PHF21A-201ENST00000323180 SUPT5HO00267 1087 aaKnown RBP14.06□□□□□ -0.16
PHF21A-201ENST00000323180 PCGF6Q9BYE7 350 aa13.84□□□□□ -0.19
PHF21A-201ENST00000323180 CHIC1Q5VXU3 224 aa13.77□□□□□ -0.21
PHF21A-201ENST00000323180 PELP1Q8IZL8 1130 aaKnown RBP13.7□□□□□ -0.22
PHF21A-201ENST00000323180 MYO15BQ96JP2 1530 aa13.67□□□□□ -0.22
PHF21A-201ENST00000323180 PPARGC1BQ86YN6 1023 aaKnown RBP13.65□□□□□ -0.22
PHF21A-201ENST00000323180 ZCCHC6Q5VYS8 1495 aaKnown RBP13.57□□□□□ -0.24
PHF21A-201ENST00000323180 DCAF1Q9Y4B6 1507 aa13.57□□□□□ -0.24
PHF21A-201ENST00000323180 ZEB1P37275 1124 aaPredicted RBP13.51□□□□□ -0.25
PHF21A-201ENST00000323180 TRIM26Q12899 539 aaPredicted RBP13.5□□□□□ -0.25
PHF21A-201ENST00000323180 DCAF8L2P0C7V8 631 aa13.45□□□□□ -0.26
PHF21A-201ENST00000323180 LOC105371045A0A1W2PR82 267 aa13.38□□□□□ -0.27
PHF21A-201ENST00000323180 CCDC180Q9P1Z9 1646 aa13.36□□□□□ -0.27
PHF21A-201ENST00000323180 SCAF1Q9H7N4 1312 aaKnown RBP13.3□□□□□ -0.28
PHF21A-201ENST00000323180 MYT1Q01538 1121 aa13.24□□□□□ -0.29
PHF21A-201ENST00000323180 TRIM41Q8WV44 630 aa13.09□□□□□ -0.31
PHF21A-201ENST00000323180 CENPBP07199 599 aaPredicted RBP13.06□□□□□ -0.32
PHF21A-201ENST00000323180 ACIN1Q9UKV3 1341 aaKnown RBP13.02□□□□□ -0.33
PHF21A-201ENST00000323180 FAM9AQ8IZU1 332 aaPredicted RBP13□□□□□ -0.33
PHF21A-201ENST00000323180 CCER1Q8TC90 406 aaPredicted RBP12.95□□□□□ -0.34
PHF21A-201ENST00000323180 NEUROD1Q13562 356 aa12.89□□□□□ -0.35
PHF21A-201ENST00000323180 EHMT2Q96KQ7 1210 aa12.88□□□□□ -0.35
PHF21A-201ENST00000323180 GTF3C3Q9Y5Q9 886 aa12.88□□□□□ -0.35
PHF21A-201ENST00000323180 ABCC9O60706 1549 aa12.87□□□□□ -0.35
PHF21A-201ENST00000323180 DIEXFQ68CQ4 756 aaKnown RBP12.87□□□□□ -0.35
PHF21A-201ENST00000323180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.84□□□□□ -0.35
PHF21A-201ENST00000323180 RSF1Q96T23 1441 aaPredicted RBP12.82□□□□□ -0.36
PHF21A-201ENST00000323180 RB1CC1Q8TDY2 1594 aa12.75□□□□□ -0.37
PHF21A-201ENST00000323180 ZNF316A6NFI3 1004 aaPredicted RBP12.67□□□□□ -0.38
PHF21A-201ENST00000323180 SCRIBQ14160 1630 aa12.65□□□□□ -0.38
PHF21A-201ENST00000323180 YTHDC1Q96MU7 727 aaKnown RBP12.63□□□□□ -0.39
PHF21A-201ENST00000323180 TTBK1Q5TCY1 1321 aaPredicted RBP12.6□□□□□ -0.39
PHF21A-201ENST00000323180 WRNQ14191 1432 aaPredicted RBP eCLIP12.53□□□□□ -0.4
PHF21A-201ENST00000323180 CLSPNQ9HAW4 1339 aa12.49□□□□□ -0.41
PHF21A-201ENST00000323180 CEP162Q5TB80 1403 aa12.47□□□□□ -0.41
PHF21A-201ENST00000323180 UBTFP17480 764 aaKnown RBP12.47□□□□□ -0.41
PHF21A-201ENST00000323180 MIER1Q8N108 512 aa12.47□□□□□ -0.41
PHF21A-201ENST00000323180 TNIKQ9UKE5 1360 aa12.44□□□□□ -0.42
PHF21A-201ENST00000323180 MROH2BQ7Z745 1585 aa12.43□□□□□ -0.42
PHF21A-201ENST00000323180 CECR2Q9BXF3 1484 aa12.43□□□□□ -0.42
PHF21A-201ENST00000323180 APLP2Q06481 763 aa12.4□□□□□ -0.42
PHF21A-201ENST00000323180 EEA1Q15075 1411 aa12.4□□□□□ -0.42
PHF21A-201ENST00000323180 HNRNPUL2Q1KMD3 747 aaKnown RBP12.39□□□□□ -0.43
PHF21A-201ENST00000323180 CSRNP3Q8WYN3 585 aa12.38□□□□□ -0.43
PHF21A-201ENST00000323180 BCL11AQ9H165 835 aa12.38□□□□□ -0.43
PHF21A-201ENST00000323180 WIZO95785 1651 aa12.36□□□□□ -0.43
PHF21A-201ENST00000323180 BAZ1AQ9NRL2 1556 aaPredicted RBP12.34□□□□□ -0.43
PHF21A-201ENST00000323180 NACADO15069 1562 aa12.34□□□□□ -0.43
PHF21A-201ENST00000323180 GOLGA3Q08378 1498 aa12.3□□□□□ -0.44
PHF21A-201ENST00000323180 CCDC88BA6NC98 1476 aa12.3□□□□□ -0.44
PHF21A-201ENST00000323180 SOGA1O94964 1423 aa12.27□□□□□ -0.45
PHF21A-201ENST00000323180 ABCC8Q09428 1581 aa12.26□□□□□ -0.45
PHF21A-201ENST00000323180 SUPT16HQ9Y5B9 1047 aaKnown RBP12.26□□□□□ -0.45
PHF21A-201ENST00000323180 EIF4G1Q04637 1599 aaKnown RBP12.26□□□□□ -0.45
PHF21A-201ENST00000323180 ANP32EQ9BTT0 268 aa12.25□□□□□ -0.45
PHF21A-201ENST00000323180 PRKCSHP14314 528 aaPredicted RBP12.23□□□□□ -0.45
PHF21A-201ENST00000323180 TOP2AP11388 1531 aaKnown RBP12.22□□□□□ -0.45
PHF21A-201ENST00000323180 CLIP1P30622 1438 aa12.2□□□□□ -0.46
PHF21A-201ENST00000323180 CEP164Q9UPV0 1460 aa12.19□□□□□ -0.46
PHF21A-201ENST00000323180 TSHZ2Q9NRE2 1034 aa12.17□□□□□ -0.46
PHF21A-201ENST00000323180 VPS8Q8N3P4 1428 aa12.16□□□□□ -0.46
PHF21A-201ENST00000323180 NEFLP07196 543 aa12.14□□□□□ -0.47
PHF21A-201ENST00000323180 RUSC2Q8N2Y8 1516 aa12.13□□□□□ -0.47
PHF21A-201ENST00000323180 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
PHF21A-201ENST00000323180 RANGAP1P46060 587 aaPredicted RBP12.09□□□□□ -0.47
PHF21A-201ENST00000323180 KIF21BO75037 1637 aa12.08□□□□□ -0.48
PHF21A-201ENST00000323180 SMARCA4P51532 1647 aa12.07□□□□□ -0.48
PHF21A-201ENST00000323180 BAZ1BQ9UIG0 1483 aaKnown RBP12.07□□□□□ -0.48
PHF21A-201ENST00000323180 DHX57Q6P158 1386 aaKnown RBP12.07□□□□□ -0.48
PHF21A-201ENST00000323180 BCANQ96GW7 911 aa12.05□□□□□ -0.48
PHF21A-201ENST00000323180 FKBP8Q14318 412 aa12.03□□□□□ -0.48
PHF21A-201ENST00000323180 ERICH6Q7L0X2 663 aa11.99□□□□□ -0.49
PHF21A-201ENST00000323180 RAPGEF2Q9Y4G8 1499 aa11.95□□□□□ -0.5
PHF21A-201ENST00000323180 RBM19Q9Y4C8 960 aaKnown RBP11.94□□□□□ -0.5
PHF21A-201ENST00000323180 ITGAEP38570 1179 aa11.93□□□□□ -0.5
PHF21A-201ENST00000323180 DDX10Q13206 875 aaKnown RBP11.91□□□□□ -0.5
PHF21A-201ENST00000323180 ANP32CO43423 234 aa11.91□□□□□ -0.5
PHF21A-201ENST00000323180 SYNJ1O43426 1573 aa11.91□□□□□ -0.5
PHF21A-201ENST00000323180 CCNB3Q8WWL7 1395 aa11.9□□□□□ -0.5
PHF21A-201ENST00000323180 RRBP1Q9P2E9 1410 aaKnown RBP11.89□□□□□ -0.51
PHF21A-201ENST00000323180 KANK4Q5T7N3 995 aaPredicted RBP11.88□□□□□ -0.51
PHF21A-201ENST00000323180 KCNH8Q96L42 1107 aa11.88□□□□□ -0.51
PHF21A-201ENST00000323180 CCER2I3L3R5 266 aa11.88□□□□□ -0.51
PHF21A-201ENST00000323180 MYT1LQ9UL68 1186 aa11.87□□□□□ -0.51
PHF21A-201ENST00000323180 CDK11AQ9UQ88 783 aaPredicted RBP11.87□□□□□ -0.51
PHF21A-201ENST00000323180 CUX2O14529 1486 aa11.85□□□□□ -0.51
PHF21A-201ENST00000323180 TIMELESSQ9UNS1 1208 aa11.84□□□□□ -0.51
PHF21A-201ENST00000323180 ERICH3Q5RHP9 1530 aa11.84□□□□□ -0.51
PHF21A-201ENST00000323180 TRIM52Q96A61 297 aa11.83□□□□□ -0.52
PHF21A-201ENST00000323180 RAB3GAP2Q9H2M9 1393 aa11.82□□□□□ -0.52
PHF21A-201ENST00000323180 ARAP1Q96P48 1450 aa11.82□□□□□ -0.52
PHF21A-201ENST00000323180 MSH5O43196 834 aa11.8□□□□□ -0.52
PHF21A-201ENST00000323180 SETD5Q9C0A6 1442 aa11.8□□□□□ -0.52
PHF21A-201ENST00000323180 FANCIQ9NVI1 1328 aa11.79□□□□□ -0.52
PHF21A-201ENST00000323180 PRXQ9BXM0 1461 aa11.77□□□□□ -0.52
PHF21A-201ENST00000323180 PPP1R15AO75807 674 aaPredicted RBP11.77□□□□□ -0.53
PHF21A-201ENST00000323180 PABPN1Q86U42 306 aaKnown RBP eCLIP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms