RNA–Protein interactions for RNA: ENST00000539018.5

TUBD1-206, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-206ENST00000539018 AEBP2Q6ZN18 517 aaPredicted RBP31.55■■■□□ 2.64
TUBD1-206ENST00000539018 CHIC1Q5VXU3 224 aa31.04■■■□□ 2.56
TUBD1-206ENST00000539018 PHF23Q9BUL5 403 aaPredicted RBP27.29■■□□□ 1.96
TUBD1-206ENST00000539018 SENP3Q9H4L4 574 aaPredicted RBP26.79■■□□□ 1.88
TUBD1-206ENST00000539018 PLPPR3Q6T4P5 718 aa25.31■■□□□ 1.64
TUBD1-206ENST00000539018 FOXD1Q16676 465 aa24.8■■□□□ 1.56
TUBD1-206ENST00000539018 ADRA2BP18089 450 aa24.01■■□□□ 1.43
TUBD1-206ENST00000539018 PPP6R1Q9UPN7 881 aa24.01■■□□□ 1.43
TUBD1-206ENST00000539018 PIAS4Q8N2W9 510 aaPredicted RBP23.47■■□□□ 1.35
TUBD1-206ENST00000539018 MSH5O43196 834 aa22.86■■□□□ 1.25
TUBD1-206ENST00000539018 PPP4R3CPQ6ZMV5 832 aa22.32■■□□□ 1.16
TUBD1-206ENST00000539018 KCNA4P22459 653 aa22.02■■□□□ 1.12
TUBD1-206ENST00000539018 SCAF1Q9H7N4 1312 aaKnown RBP22.02■■□□□ 1.12
TUBD1-206ENST00000539018 NCBP3Q53F19 620 aaKnown RBP21.82■■□□□ 1.08
TUBD1-206ENST00000539018 MAPK8IP2Q13387 824 aaPredicted RBP21.72■■□□□ 1.07
TUBD1-206ENST00000539018 CNKSR2Q8WXI2 1034 aa21.66■■□□□ 1.06
TUBD1-206ENST00000539018 NPM3O75607 178 aaKnown RBP21.47■■□□□ 1.03
TUBD1-206ENST00000539018 DMRT2Q9Y5R5 561 aa21.4■■□□□ 1.02
TUBD1-206ENST00000539018 RNF216Q9NWF9 866 aaPredicted RBP21.18■□□□□ 0.98
TUBD1-206ENST00000539018 HOXD11P31277 338 aaPredicted RBP21.03■□□□□ 0.96
TUBD1-206ENST00000539018 SLC4A1APQ9BWU0 796 aaKnown RBP21.03■□□□□ 0.96
TUBD1-206ENST00000539018 POTEDQ86YR6 584 aa20.9■□□□□ 0.94
TUBD1-206ENST00000539018 DNAJC5BQ9UF47 199 aa20.8■□□□□ 0.92
TUBD1-206ENST00000539018 EHMT2Q96KQ7 1210 aa20.66■□□□□ 0.9
TUBD1-206ENST00000539018 DCAF8L1A6NGE4 600 aa20.5■□□□□ 0.87
TUBD1-206ENST00000539018 CSRNP3Q8WYN3 585 aa20.3■□□□□ 0.84
TUBD1-206ENST00000539018 ZBTB22O15209 634 aa20.25■□□□□ 0.83
TUBD1-206ENST00000539018 FOXD4L1Q9NU39 408 aa20.24■□□□□ 0.83
TUBD1-206ENST00000539018 SLC4A2P04920 1241 aa20.21■□□□□ 0.83
TUBD1-206ENST00000539018 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.08■□□□□ 0.81
TUBD1-206ENST00000539018 MYCNP04198 464 aaPredicted RBP19.85■□□□□ 0.77
TUBD1-206ENST00000539018 U3KPZ7 1027 aaPredicted RBP19.75■□□□□ 0.75
TUBD1-206ENST00000539018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.6■□□□□ 0.73
TUBD1-206ENST00000539018 HNRNPUL2Q1KMD3 747 aaKnown RBP19.6■□□□□ 0.73
TUBD1-206ENST00000539018 RNF39Q9H2S5 420 aa19.56■□□□□ 0.72
TUBD1-206ENST00000539018 SAMD1Q6SPF0 538 aaPredicted RBP19.54■□□□□ 0.72
TUBD1-206ENST00000539018 ATXN8OSP0DMR3 200 aa19.51■□□□□ 0.71
TUBD1-206ENST00000539018 APLP2Q06481 763 aa19.37■□□□□ 0.69
TUBD1-206ENST00000539018 C1QBPQ07021 282 aaKnown RBP19.35■□□□□ 0.69
TUBD1-206ENST00000539018 ATF5Q9Y2D1 282 aaPredicted RBP19.26■□□□□ 0.67
TUBD1-206ENST00000539018 CACNB1Q02641 598 aaPredicted RBP19.14■□□□□ 0.65
TUBD1-206ENST00000539018 SPINK5Q9NQ38 1064 aaPredicted RBP19.13■□□□□ 0.65
TUBD1-206ENST00000539018 CAPN15O75808 1086 aa19.08■□□□□ 0.64
TUBD1-206ENST00000539018 ZNF219Q9P2Y4 722 aaPredicted RBP19.05■□□□□ 0.64
TUBD1-206ENST00000539018 TRHP20396 242 aaPredicted RBP19.03■□□□□ 0.64
TUBD1-206ENST00000539018 POLA2Q14181 598 aa18.75■□□□□ 0.59
TUBD1-206ENST00000539018 ABCB7O75027 752 aa18.72■□□□□ 0.59
TUBD1-206ENST00000539018 DSG3P32926 999 aa18.68■□□□□ 0.58
TUBD1-206ENST00000539018 FBLN2P98095 1184 aa18.5■□□□□ 0.55
TUBD1-206ENST00000539018 ZBTB12Q9Y330 459 aaPredicted RBP18.5■□□□□ 0.55
TUBD1-206ENST00000539018 MKRN4PQ13434 485 aaPredicted RBP18.44■□□□□ 0.54
TUBD1-206ENST00000539018 FKBP8Q14318 412 aa18.37■□□□□ 0.53
TUBD1-206ENST00000539018 SPDYE4A6NLX3 237 aa18.16■□□□□ 0.5
TUBD1-206ENST00000539018 OSCARQ8IYS5 282 aa18.11■□□□□ 0.49
TUBD1-206ENST00000539018 SPDYE2BA6NHP3 402 aa17.99■□□□□ 0.47
TUBD1-206ENST00000539018 SPDYE6P0CI01 402 aa17.99■□□□□ 0.47
TUBD1-206ENST00000539018 SPDYE2Q495Y8 402 aa17.99■□□□□ 0.47
TUBD1-206ENST00000539018 ZNF692Q9BU19 519 aaPredicted RBP17.96■□□□□ 0.47
TUBD1-206ENST00000539018 PROM2Q8N271 834 aa17.86■□□□□ 0.45
TUBD1-206ENST00000539018 SSUH2Q9Y2M2 353 aa17.86■□□□□ 0.45
TUBD1-206ENST00000539018 RBM42Q9BTD8 480 aaKnown RBP17.84■□□□□ 0.45
TUBD1-206ENST00000539018 PABPN1Q86U42 306 aaKnown RBP eCLIP17.72■□□□□ 0.43
TUBD1-206ENST00000539018 FBXO3Q9UK99 471 aa17.68■□□□□ 0.42
TUBD1-206ENST00000539018 AKT1S1Q96B36 256 aa17.65■□□□□ 0.42
TUBD1-206ENST00000539018 STAG3Q9UJ98 1225 aa17.49■□□□□ 0.39
TUBD1-206ENST00000539018 REM2Q8IYK8 340 aaPredicted RBP17.46■□□□□ 0.39
TUBD1-206ENST00000539018 NISCHQ9Y2I1 1504 aa17.45■□□□□ 0.38
TUBD1-206ENST00000539018 VASPP50552 380 aaPredicted RBP17.42■□□□□ 0.38
TUBD1-206ENST00000539018 SPDYE1Q8NFV5 336 aaPredicted RBP17.42■□□□□ 0.38
TUBD1-206ENST00000539018 CLEC11AQ9Y240 323 aa17.34■□□□□ 0.37
TUBD1-206ENST00000539018 PITPNM1O00562 1244 aa17.26■□□□□ 0.35
TUBD1-206ENST00000539018 PLCD3Q8N3E9 789 aa17.22■□□□□ 0.35
TUBD1-206ENST00000539018 PRR29P0C7W0 189 aa17.21■□□□□ 0.35
TUBD1-206ENST00000539018 MIER1Q8N108 512 aa17.2■□□□□ 0.34
TUBD1-206ENST00000539018 IFNLR1Q8IU57 520 aaPredicted RBP17.18■□□□□ 0.34
TUBD1-206ENST00000539018 PLEKHG5O94827 1062 aa17.14■□□□□ 0.33
TUBD1-206ENST00000539018 AMER1Q5JTC6 1135 aaPredicted RBP17.11■□□□□ 0.33
TUBD1-206ENST00000539018 KLHL34Q8N239 644 aa17.1■□□□□ 0.33
TUBD1-206ENST00000539018 RTN4Q9NQC3 1192 aaKnown RBP17.03■□□□□ 0.32
TUBD1-206ENST00000539018 ZBTB47Q9UFB7 747 aaPredicted RBP17.03■□□□□ 0.32
TUBD1-206ENST00000539018 CHRDL2Q6WN34 429 aa17.01■□□□□ 0.31
TUBD1-206ENST00000539018 CREBZFQ9NS37 354 aa17.01■□□□□ 0.31
TUBD1-206ENST00000539018 SPOCK2Q92563 424 aa16.97■□□□□ 0.31
TUBD1-206ENST00000539018 FXR2P51116 673 aaKnown RBP eCLIP16.89■□□□□ 0.29
TUBD1-206ENST00000539018 CHADLQ6NUI6 762 aa16.87■□□□□ 0.29
TUBD1-206ENST00000539018 PRKAR2AP13861 404 aaKnown RBP16.84■□□□□ 0.29
TUBD1-206ENST00000539018 MNX1P50219 401 aaPredicted RBP16.84■□□□□ 0.29
TUBD1-206ENST00000539018 PIP4P2Q8N4L2 257 aa16.81■□□□□ 0.28
TUBD1-206ENST00000539018 NPM1P06748 294 aaKnown RBP eCLIP16.77■□□□□ 0.28
TUBD1-206ENST00000539018 FARP1Q9Y4F1 1045 aaPredicted RBP16.74■□□□□ 0.27
TUBD1-206ENST00000539018 NUBP1P53384 320 aa16.73■□□□□ 0.27
TUBD1-206ENST00000539018 CIZ1Q9ULV3 898 aaPredicted RBP16.68■□□□□ 0.26
TUBD1-206ENST00000539018 PKD2Q13563 968 aa16.67■□□□□ 0.26
TUBD1-206ENST00000539018 GSE1Q14687 1217 aa16.63■□□□□ 0.25
TUBD1-206ENST00000539018 FAM212AQ96EL1 285 aa16.62■□□□□ 0.25
TUBD1-206ENST00000539018 DCAF8Q5TAQ9 597 aa16.61■□□□□ 0.25
TUBD1-206ENST00000539018 RASEFQ8IZ41 740 aa16.61■□□□□ 0.25
TUBD1-206ENST00000539018 ECM2O94769 699 aaPredicted RBP16.57■□□□□ 0.24
TUBD1-206ENST00000539018 POTEHQ6S545 545 aa16.57■□□□□ 0.24
TUBD1-206ENST00000539018 TRIM41Q8WV44 630 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms