Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC9.67□□□□□ -0.86
COL15A1P39059 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
COL15A1P39059 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 TRPS1-209ENST00000519674 3116 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 AC093844.1-201ENST00000514910 1361 ntBASIC9.67□□□□□ -0.86
COL15A1P39059 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
COL15A1P39059 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC9.67□□□□□ -0.86
COL15A1P39059 ISX-201ENST00000308700 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 AC023886.2-201ENST00000321285 411 ntBASIC9.67□□□□□ -0.86
COL15A1P39059 SNORA73B-201ENST00000363217 204 ntBASIC9.67□□□□□ -0.86
COL15A1P39059 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
COL15A1P39059 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 U3.31-201ENST00000408113 216 ntBASIC9.67□□□□□ -0.86
COL15A1P39059 AC020983.1-201ENST00000417063 543 ntBASIC9.67□□□□□ -0.86
COL15A1P39059 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC9.67□□□□□ -0.86
COL15A1P39059 TDGF1P6-201ENST00000463873 448 ntBASIC9.67□□□□□ -0.86
COL15A1P39059 RN7SL456P-201ENST00000469290 295 ntBASIC9.67□□□□□ -0.86
COL15A1P39059 RN7SL233P-201ENST00000469988 277 ntBASIC9.67□□□□□ -0.86
COL15A1P39059 AL079303.1-201ENST00000486611 463 ntBASIC9.67□□□□□ -0.86
COL15A1P39059 CHCHD2P7-201ENST00000508008 452 ntBASIC9.67□□□□□ -0.86
COL15A1P39059 AC095059.2-201ENST00000510601 933 ntBASIC9.67□□□□□ -0.86
COL15A1P39059 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC9.67□□□□□ -0.86
COL15A1P39059 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC9.67□□□□□ -0.86
COL15A1P39059 LDHC-204ENST00000536880 957 ntTSL 5 BASIC9.67□□□□□ -0.86
COL15A1P39059 AC087286.4-201ENST00000558757 746 ntTSL 3 BASIC9.67□□□□□ -0.86
COL15A1P39059 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC9.67□□□□□ -0.86
COL15A1P39059 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC9.67□□□□□ -0.86
COL15A1P39059 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
COL15A1P39059 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC9.67□□□□□ -0.86
COL15A1P39059 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC9.67□□□□□ -0.86
COL15A1P39059 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC9.67□□□□□ -0.86
COL15A1P39059 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC9.67□□□□□ -0.86
COL15A1P39059 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 OR7E122P-202ENST00000641144 6171 ntBASIC9.67□□□□□ -0.86
COL15A1P39059 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 WASF5P-205ENST00000428639 1455 ntBASIC9.67□□□□□ -0.86
COL15A1P39059 SLC2A3P4-201ENST00000521259 1471 ntBASIC9.67□□□□□ -0.86
COL15A1P39059 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
COL15A1P39059 FTX-215ENST00000638681 9771 ntTSL 5 BASIC9.67□□□□□ -0.86
COL15A1P39059 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
COL15A1P39059 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC9.66□□□□□ -0.86
COL15A1P39059 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
COL15A1P39059 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC9.66□□□□□ -0.86
COL15A1P39059 ERBB3-213ENST00000549832 3289 ntTSL 2 BASIC9.66□□□□□ -0.86
COL15A1P39059 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC9.66□□□□□ -0.86
COL15A1P39059 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
COL15A1P39059 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
COL15A1P39059 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
COL15A1P39059 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
COL15A1P39059 RBMX2P2-201ENST00000257020 946 ntBASIC9.66□□□□□ -0.86
COL15A1P39059 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
COL15A1P39059 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC9.66□□□□□ -0.86
COL15A1P39059 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC9.66□□□□□ -0.86
COL15A1P39059 GSTA10P-201ENST00000412182 576 ntBASIC9.66□□□□□ -0.86
COL15A1P39059 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC9.66□□□□□ -0.86
COL15A1P39059 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC9.66□□□□□ -0.86
COL15A1P39059 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC9.66□□□□□ -0.86
COL15A1P39059 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
COL15A1P39059 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC9.66□□□□□ -0.86
COL15A1P39059 AC007547.2-201ENST00000468802 360 ntBASIC9.66□□□□□ -0.86
COL15A1P39059 RPL21P42-201ENST00000488408 464 ntBASIC9.66□□□□□ -0.86
COL15A1P39059 AP004833.3-201ENST00000531893 322 ntBASIC9.66□□□□□ -0.86
COL15A1P39059 AC005070.1-201ENST00000603744 365 ntBASIC9.66□□□□□ -0.86
COL15A1P39059 AL591222.2-201ENST00000604443 754 ntBASIC9.66□□□□□ -0.86
COL15A1P39059 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
COL15A1P39059 CACNB2-214ENST00000612743 597 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
COL15A1P39059 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC9.66□□□□□ -0.86
COL15A1P39059 AC106795.5-201ENST00000623288 454 ntBASIC9.66□□□□□ -0.86
COL15A1P39059 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC9.66□□□□□ -0.86
COL15A1P39059 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
COL15A1P39059 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
COL15A1P39059 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
COL15A1P39059 XRCC6P2-201ENST00000457831 1822 ntBASIC9.66□□□□□ -0.86
COL15A1P39059 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
COL15A1P39059 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
COL15A1P39059 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC9.66□□□□□ -0.86
COL15A1P39059 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC9.66□□□□□ -0.86
COL15A1P39059 AC145207.5-201ENST00000582866 2682 ntBASIC9.66□□□□□ -0.86
COL15A1P39059 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC9.66□□□□□ -0.86
COL15A1P39059 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
COL15A1P39059 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC9.66□□□□□ -0.86
COL15A1P39059 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
COL15A1P39059 AC036108.4-201ENST00000611654 2516 ntBASIC9.65□□□□□ -0.86
COL15A1P39059 AC096745.2-201ENST00000627783 1914 ntBASIC9.65□□□□□ -0.86
COL15A1P39059 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms