RNA–Protein interactions for RNA: ENST00000536880.5

LDHC-204, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-204ENST00000536880 AEBP2Q6ZN18 517 aaPredicted RBP25.94■■□□□ 1.74
LDHC-204ENST00000536880 CHIC1Q5VXU3 224 aa25.29■■□□□ 1.64
LDHC-204ENST00000536880 PHF23Q9BUL5 403 aaPredicted RBP22.21■■□□□ 1.15
LDHC-204ENST00000536880 SENP3Q9H4L4 574 aaPredicted RBP22.08■■□□□ 1.13
LDHC-204ENST00000536880 PLPPR3Q6T4P5 718 aa20.55■□□□□ 0.88
LDHC-204ENST00000536880 FOXD1Q16676 465 aa20.47■□□□□ 0.87
LDHC-204ENST00000536880 ADRA2BP18089 450 aa19.65■□□□□ 0.74
LDHC-204ENST00000536880 PPP6R1Q9UPN7 881 aa19.63■□□□□ 0.73
LDHC-204ENST00000536880 PIAS4Q8N2W9 510 aaPredicted RBP19.36■□□□□ 0.69
LDHC-204ENST00000536880 MSH5O43196 834 aa18.94■□□□□ 0.62
LDHC-204ENST00000536880 NISCHQ9Y2I1 1504 aa18.09■□□□□ 0.49
LDHC-204ENST00000536880 PPP4R3CPQ6ZMV5 832 aa18.09■□□□□ 0.49
LDHC-204ENST00000536880 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
LDHC-204ENST00000536880 MAPK8IP2Q13387 824 aaPredicted RBP17.84■□□□□ 0.45
LDHC-204ENST00000536880 NCBP3Q53F19 620 aaKnown RBP17.64■□□□□ 0.41
LDHC-204ENST00000536880 KCNA4P22459 653 aa17.6■□□□□ 0.41
LDHC-204ENST00000536880 CNKSR2Q8WXI2 1034 aa17.59■□□□□ 0.41
LDHC-204ENST00000536880 DMRT2Q9Y5R5 561 aa17.59■□□□□ 0.41
LDHC-204ENST00000536880 POTEDQ86YR6 584 aa17.42■□□□□ 0.38
LDHC-204ENST00000536880 NPM3O75607 178 aaKnown RBP17.33■□□□□ 0.36
LDHC-204ENST00000536880 RNF216Q9NWF9 866 aaPredicted RBP17.25■□□□□ 0.35
LDHC-204ENST00000536880 HOXD11P31277 338 aaPredicted RBP17.17■□□□□ 0.34
LDHC-204ENST00000536880 DCAF8L1A6NGE4 600 aa16.97■□□□□ 0.31
LDHC-204ENST00000536880 SLC4A1APQ9BWU0 796 aaKnown RBP16.78■□□□□ 0.28
LDHC-204ENST00000536880 DNAJC5BQ9UF47 199 aa16.71■□□□□ 0.27
LDHC-204ENST00000536880 ABCC9O60706 1549 aa16.5■□□□□ 0.23
LDHC-204ENST00000536880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.48■□□□□ 0.23
LDHC-204ENST00000536880 CCDC180Q9P1Z9 1646 aa16.39■□□□□ 0.21
LDHC-204ENST00000536880 SLC4A2P04920 1241 aa16.35■□□□□ 0.21
LDHC-204ENST00000536880 EHMT2Q96KQ7 1210 aa16.28■□□□□ 0.2
LDHC-204ENST00000536880 FOXD4L1Q9NU39 408 aa16.23■□□□□ 0.19
LDHC-204ENST00000536880 RNF39Q9H2S5 420 aa16.18■□□□□ 0.18
LDHC-204ENST00000536880 ZBTB22O15209 634 aa16.15■□□□□ 0.18
LDHC-204ENST00000536880 U3KPZ7 1027 aaPredicted RBP16.13■□□□□ 0.17
LDHC-204ENST00000536880 MYCNP04198 464 aaPredicted RBP16.04■□□□□ 0.16
LDHC-204ENST00000536880 CSRNP3Q8WYN3 585 aa16.02■□□□□ 0.16
LDHC-204ENST00000536880 C1QBPQ07021 282 aaKnown RBP16.01■□□□□ 0.15
LDHC-204ENST00000536880 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.15
LDHC-204ENST00000536880 HNRNPUL2Q1KMD3 747 aaKnown RBP15.96■□□□□ 0.15
LDHC-204ENST00000536880 CACNB1Q02641 598 aaPredicted RBP15.89■□□□□ 0.13
LDHC-204ENST00000536880 SAMD1Q6SPF0 538 aaPredicted RBP15.88■□□□□ 0.13
LDHC-204ENST00000536880 APLP2Q06481 763 aa15.82■□□□□ 0.12
LDHC-204ENST00000536880 CAPN15O75808 1086 aa15.73■□□□□ 0.11
LDHC-204ENST00000536880 SPINK5Q9NQ38 1064 aaPredicted RBP15.72■□□□□ 0.11
LDHC-204ENST00000536880 RB1CC1Q8TDY2 1594 aa15.65■□□□□ 0.1
LDHC-204ENST00000536880 ATXN8OSP0DMR3 200 aa15.63■□□□□ 0.09
LDHC-204ENST00000536880 TRHP20396 242 aaPredicted RBP15.63■□□□□ 0.09
LDHC-204ENST00000536880 ZNF219Q9P2Y4 722 aaPredicted RBP15.59■□□□□ 0.09
LDHC-204ENST00000536880 ATF5Q9Y2D1 282 aaPredicted RBP15.58■□□□□ 0.08
LDHC-204ENST00000536880 NACADO15069 1562 aa15.49■□□□□ 0.07
LDHC-204ENST00000536880 UNC13AQ9UPW8 1703 aa15.4■□□□□ 0.06
LDHC-204ENST00000536880 ABCB7O75027 752 aa15.4■□□□□ 0.06
LDHC-204ENST00000536880 DSG3P32926 999 aa15.39■□□□□ 0.05
LDHC-204ENST00000536880 POLA2Q14181 598 aa15.32■□□□□ 0.04
LDHC-204ENST00000536880 PABPN1Q86U42 306 aaKnown RBP eCLIP15.29■□□□□ 0.04
LDHC-204ENST00000536880 DCAF8L2P0C7V8 631 aa15.27■□□□□ 0.04
LDHC-204ENST00000536880 BICRAQ9NZM4 1560 aa15.23■□□□□ 0.03
LDHC-204ENST00000536880 MYO15BQ96JP2 1530 aa15.2■□□□□ 0.02
LDHC-204ENST00000536880 ZBTB12Q9Y330 459 aaPredicted RBP15.08■□□□□ 0
LDHC-204ENST00000536880 FBLN2P98095 1184 aa15.01□□□□□ -0.01
LDHC-204ENST00000536880 ZCCHC6Q5VYS8 1495 aaKnown RBP14.96□□□□□ -0.01
LDHC-204ENST00000536880 SHROOM4Q9ULL8 1493 aa14.96□□□□□ -0.01
LDHC-204ENST00000536880 DCAF1Q9Y4B6 1507 aa14.94□□□□□ -0.02
LDHC-204ENST00000536880 CC2D2AQ9P2K1 1620 aa14.93□□□□□ -0.02
LDHC-204ENST00000536880 SCRIBQ14160 1630 aa14.89□□□□□ -0.03
LDHC-204ENST00000536880 CECR2Q9BXF3 1484 aa14.89□□□□□ -0.03
LDHC-204ENST00000536880 MKRN4PQ13434 485 aaPredicted RBP14.88□□□□□ -0.03
LDHC-204ENST00000536880 EIF4G1Q04637 1599 aaKnown RBP14.85□□□□□ -0.03
LDHC-204ENST00000536880 OSCARQ8IYS5 282 aa14.82□□□□□ -0.04
LDHC-204ENST00000536880 RBM42Q9BTD8 480 aaKnown RBP14.72□□□□□ -0.05
LDHC-204ENST00000536880 SPDYE2BA6NHP3 402 aa14.63□□□□□ -0.07
LDHC-204ENST00000536880 SPDYE6P0CI01 402 aa14.63□□□□□ -0.07
LDHC-204ENST00000536880 SPDYE2Q495Y8 402 aa14.63□□□□□ -0.07
LDHC-204ENST00000536880 ZNF692Q9BU19 519 aaPredicted RBP14.61□□□□□ -0.07
LDHC-204ENST00000536880 SPDYE4A6NLX3 237 aa14.59□□□□□ -0.07
LDHC-204ENST00000536880 FKBP8Q14318 412 aa14.56□□□□□ -0.08
LDHC-204ENST00000536880 AKT1S1Q96B36 256 aa14.49□□□□□ -0.09
LDHC-204ENST00000536880 DNAJC5Q9H3Z4 198 aa14.48□□□□□ -0.09
LDHC-204ENST00000536880 SSUH2Q9Y2M2 353 aa14.47□□□□□ -0.09
LDHC-204ENST00000536880 REM2Q8IYK8 340 aaPredicted RBP14.36□□□□□ -0.11
LDHC-204ENST00000536880 CUX2O14529 1486 aa14.31□□□□□ -0.12
LDHC-204ENST00000536880 NCAPD3P42695 1498 aa14.27□□□□□ -0.12
LDHC-204ENST00000536880 ERCC6Q03468 1493 aa14.25□□□□□ -0.13
LDHC-204ENST00000536880 SPDYE1Q8NFV5 336 aaPredicted RBP14.24□□□□□ -0.13
LDHC-204ENST00000536880 CLEC11AQ9Y240 323 aa14.24□□□□□ -0.13
LDHC-204ENST00000536880 PROM2Q8N271 834 aa14.22□□□□□ -0.13
LDHC-204ENST00000536880 ATAD2BQ9ULI0 1458 aa14.2□□□□□ -0.14
LDHC-204ENST00000536880 PITPNM1O00562 1244 aa14.2□□□□□ -0.14
LDHC-204ENST00000536880 SMARCA4P51532 1647 aa14.19□□□□□ -0.14
LDHC-204ENST00000536880 HMGXB3Q12766 1538 aa14.19□□□□□ -0.14
LDHC-204ENST00000536880 SMARCA2P51531 1590 aa14.17□□□□□ -0.14
LDHC-204ENST00000536880 STAG3Q9UJ98 1225 aa14.14□□□□□ -0.15
LDHC-204ENST00000536880 NESP48681 1621 aa14.14□□□□□ -0.15
LDHC-204ENST00000536880 CHRDL2Q6WN34 429 aa14.12□□□□□ -0.15
LDHC-204ENST00000536880 THOC2Q8NI27 1593 aaKnown RBP14.08□□□□□ -0.16
LDHC-204ENST00000536880 PRR29P0C7W0 189 aa14.07□□□□□ -0.16
LDHC-204ENST00000536880 BAZ1BQ9UIG0 1483 aaKnown RBP14.06□□□□□ -0.16
LDHC-204ENST00000536880 BAZ1AQ9NRL2 1556 aaPredicted RBP14.06□□□□□ -0.16
LDHC-204ENST00000536880 FBXO3Q9UK99 471 aa14.06□□□□□ -0.16
LDHC-204ENST00000536880 PEG3Q9GZU2 1588 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms