RNA–Protein interactions for RNA: ENST00000637011.1

CRNDE-214, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 865 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-214ENST00000637011 NISCHQ9Y2I1 1504 aa16.7■□□□□ 0.26
CRNDE-214ENST00000637011 AEBP2Q6ZN18 517 aaPredicted RBP16.64■□□□□ 0.25
CRNDE-214ENST00000637011 CHIC1Q5VXU3 224 aa15.68■□□□□ 0.1
CRNDE-214ENST00000637011 CCDC180Q9P1Z9 1646 aa14.26□□□□□ -0.13
CRNDE-214ENST00000637011 SENP3Q9H4L4 574 aaPredicted RBP14.22□□□□□ -0.13
CRNDE-214ENST00000637011 ZCCHC6Q5VYS8 1495 aaKnown RBP14.06□□□□□ -0.16
CRNDE-214ENST00000637011 PHF23Q9BUL5 403 aaPredicted RBP14.02□□□□□ -0.17
CRNDE-214ENST00000637011 SHROOM4Q9ULL8 1493 aa13.94□□□□□ -0.18
CRNDE-214ENST00000637011 DCAF8L2P0C7V8 631 aa13.86□□□□□ -0.19
CRNDE-214ENST00000637011 DCAF1Q9Y4B6 1507 aa13.85□□□□□ -0.19
CRNDE-214ENST00000637011 SUPT5HO00267 1087 aaKnown RBP13.79□□□□□ -0.2
CRNDE-214ENST00000637011 ABCC9O60706 1549 aa13.65□□□□□ -0.22
CRNDE-214ENST00000637011 MYO15BQ96JP2 1530 aa13.54□□□□□ -0.24
CRNDE-214ENST00000637011 NACADO15069 1562 aa13.3□□□□□ -0.28
CRNDE-214ENST00000637011 FOXD1Q16676 465 aa13.27□□□□□ -0.29
CRNDE-214ENST00000637011 RSF1Q96T23 1441 aaPredicted RBP13.15□□□□□ -0.3
CRNDE-214ENST00000637011 SCRIBQ14160 1630 aa13.15□□□□□ -0.3
CRNDE-214ENST00000637011 RB1CC1Q8TDY2 1594 aa13.07□□□□□ -0.32
CRNDE-214ENST00000637011 TRIM41Q8WV44 630 aa13.03□□□□□ -0.32
CRNDE-214ENST00000637011 HRCP23327 699 aa12.92□□□□□ -0.34
CRNDE-214ENST00000637011 LOC105371045A0A1W2PR82 267 aa12.9□□□□□ -0.34
CRNDE-214ENST00000637011 PCGF6Q9BYE7 350 aa12.89□□□□□ -0.35
CRNDE-214ENST00000637011 BAZ1AQ9NRL2 1556 aaPredicted RBP12.89□□□□□ -0.35
CRNDE-214ENST00000637011 TRIM26Q12899 539 aaPredicted RBP12.88□□□□□ -0.35
CRNDE-214ENST00000637011 CECR2Q9BXF3 1484 aa12.86□□□□□ -0.35
CRNDE-214ENST00000637011 MROH2BQ7Z745 1585 aa12.85□□□□□ -0.35
CRNDE-214ENST00000637011 DNAJC5BQ9UF47 199 aa12.79□□□□□ -0.36
CRNDE-214ENST00000637011 ZEB1P37275 1124 aaPredicted RBP12.77□□□□□ -0.37
CRNDE-214ENST00000637011 UNC13AQ9UPW8 1703 aa12.76□□□□□ -0.37
CRNDE-214ENST00000637011 PABPN1Q86U42 306 aaKnown RBP eCLIP12.75□□□□□ -0.37
CRNDE-214ENST00000637011 WIZO95785 1651 aa12.71□□□□□ -0.37
CRNDE-214ENST00000637011 BICRAQ9NZM4 1560 aa12.71□□□□□ -0.37
CRNDE-214ENST00000637011 TOP2AP11388 1531 aaKnown RBP12.69□□□□□ -0.38
CRNDE-214ENST00000637011 FAM9AQ8IZU1 332 aaPredicted RBP12.69□□□□□ -0.38
CRNDE-214ENST00000637011 SMARCA4P51532 1647 aa12.66□□□□□ -0.38
CRNDE-214ENST00000637011 EEA1Q15075 1411 aa12.62□□□□□ -0.39
CRNDE-214ENST00000637011 CCDC88BA6NC98 1476 aa12.61□□□□□ -0.39
CRNDE-214ENST00000637011 SMARCA2P51531 1590 aa12.52□□□□□ -0.4
CRNDE-214ENST00000637011 PEG3Q9GZU2 1588 aa12.52□□□□□ -0.4
CRNDE-214ENST00000637011 CSRNP3Q8WYN3 585 aa12.51□□□□□ -0.41
CRNDE-214ENST00000637011 EIF4G1Q04637 1599 aaKnown RBP12.47□□□□□ -0.41
CRNDE-214ENST00000637011 MSH5O43196 834 aa12.47□□□□□ -0.41
CRNDE-214ENST00000637011 PLPPR3Q6T4P5 718 aa12.47□□□□□ -0.41
CRNDE-214ENST00000637011 TNIKQ9UKE5 1360 aa12.46□□□□□ -0.41
CRNDE-214ENST00000637011 ATAD2BQ9ULI0 1458 aa12.43□□□□□ -0.42
CRNDE-214ENST00000637011 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
CRNDE-214ENST00000637011 UBTFP17480 764 aaKnown RBP12.42□□□□□ -0.42
CRNDE-214ENST00000637011 WRNQ14191 1432 aaPredicted RBP eCLIP12.42□□□□□ -0.42
CRNDE-214ENST00000637011 BAZ1BQ9UIG0 1483 aaKnown RBP12.41□□□□□ -0.42
CRNDE-214ENST00000637011 POTEDQ86YR6 584 aa12.4□□□□□ -0.42
CRNDE-214ENST00000637011 PIAS4Q8N2W9 510 aaPredicted RBP12.37□□□□□ -0.43
CRNDE-214ENST00000637011 ABCC8Q09428 1581 aa12.36□□□□□ -0.43
CRNDE-214ENST00000637011 GOLGA3Q08378 1498 aa12.35□□□□□ -0.43
CRNDE-214ENST00000637011 PPARGC1BQ86YN6 1023 aaKnown RBP12.35□□□□□ -0.43
CRNDE-214ENST00000637011 CC2D2AQ9P2K1 1620 aa12.35□□□□□ -0.43
CRNDE-214ENST00000637011 SOGA1O94964 1423 aa12.33□□□□□ -0.44
CRNDE-214ENST00000637011 CEP162Q5TB80 1403 aa12.33□□□□□ -0.44
CRNDE-214ENST00000637011 CEP164Q9UPV0 1460 aa12.33□□□□□ -0.44
CRNDE-214ENST00000637011 APLP2Q06481 763 aa12.32□□□□□ -0.44
CRNDE-214ENST00000637011 PPP6R1Q9UPN7 881 aa12.31□□□□□ -0.44
CRNDE-214ENST00000637011 NCAPD3P42695 1498 aa12.3□□□□□ -0.44
CRNDE-214ENST00000637011 CCER1Q8TC90 406 aaPredicted RBP12.29□□□□□ -0.44
CRNDE-214ENST00000637011 ADRA2BP18089 450 aa12.25□□□□□ -0.45
CRNDE-214ENST00000637011 HMGXB3Q12766 1538 aa12.24□□□□□ -0.45
CRNDE-214ENST00000637011 KIF21BO75037 1637 aa12.21□□□□□ -0.46
CRNDE-214ENST00000637011 RUSC2Q8N2Y8 1516 aa12.18□□□□□ -0.46
CRNDE-214ENST00000637011 CLIP1P30622 1438 aa12.18□□□□□ -0.46
CRNDE-214ENST00000637011 TOP2BQ02880 1626 aa12.16□□□□□ -0.46
CRNDE-214ENST00000637011 SYNJ1O43426 1573 aa12.15□□□□□ -0.46
CRNDE-214ENST00000637011 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.14□□□□□ -0.47
CRNDE-214ENST00000637011 KIF27Q86VH2 1401 aa12.13□□□□□ -0.47
CRNDE-214ENST00000637011 VPS8Q8N3P4 1428 aa12.12□□□□□ -0.47
CRNDE-214ENST00000637011 CFTRP13569 1480 aa12.12□□□□□ -0.47
CRNDE-214ENST00000637011 ERICH3Q5RHP9 1530 aa12.1□□□□□ -0.47
CRNDE-214ENST00000637011 BIVM-ERCC5R4GMW8 1640 aa12.09□□□□□ -0.47
CRNDE-214ENST00000637011 PRXQ9BXM0 1461 aa12.06□□□□□ -0.48
CRNDE-214ENST00000637011 CADPSQ9ULU8 1353 aa12.05□□□□□ -0.48
CRNDE-214ENST00000637011 RAPGEF2Q9Y4G8 1499 aa12.05□□□□□ -0.48
CRNDE-214ENST00000637011 TTBK1Q5TCY1 1321 aaPredicted RBP12.03□□□□□ -0.48
CRNDE-214ENST00000637011 CLSPNQ9HAW4 1339 aa12.03□□□□□ -0.48
CRNDE-214ENST00000637011 CUX1P39880 1505 aa11.98□□□□□ -0.49
CRNDE-214ENST00000637011 ZNF316A6NFI3 1004 aaPredicted RBP11.98□□□□□ -0.49
CRNDE-214ENST00000637011 DIEXFQ68CQ4 756 aaKnown RBP11.98□□□□□ -0.49
CRNDE-214ENST00000637011 CENPBP07199 599 aaPredicted RBP11.97□□□□□ -0.49
CRNDE-214ENST00000637011 HNRNPUL2Q1KMD3 747 aaKnown RBP11.97□□□□□ -0.49
CRNDE-214ENST00000637011 RANGAP1P46060 587 aaPredicted RBP11.96□□□□□ -0.49
CRNDE-214ENST00000637011 IGF1RP08069 1367 aa11.93□□□□□ -0.5
CRNDE-214ENST00000637011 CARMIL1Q5VZK9 1371 aa11.92□□□□□ -0.5
CRNDE-214ENST00000637011 CUX2O14529 1486 aa11.89□□□□□ -0.51
CRNDE-214ENST00000637011 PRDM2Q13029 1718 aa11.89□□□□□ -0.51
CRNDE-214ENST00000637011 FHAD1B1AJZ9 1412 aa11.87□□□□□ -0.51
CRNDE-214ENST00000637011 MAP3K1Q13233 1512 aa11.87□□□□□ -0.51
CRNDE-214ENST00000637011 ARAP1Q96P48 1450 aa11.86□□□□□ -0.51
CRNDE-214ENST00000637011 FANCD2Q9BXW9 1451 aa11.85□□□□□ -0.51
CRNDE-214ENST00000637011 PELP1Q8IZL8 1130 aaKnown RBP11.85□□□□□ -0.51
CRNDE-214ENST00000637011 RRBP1Q9P2E9 1410 aaKnown RBP11.83□□□□□ -0.52
CRNDE-214ENST00000637011 FGD5Q6ZNL6 1462 aa11.83□□□□□ -0.52
CRNDE-214ENST00000637011 CCNB3Q8WWL7 1395 aa11.81□□□□□ -0.52
CRNDE-214ENST00000637011 KANK4Q5T7N3 995 aaPredicted RBP11.81□□□□□ -0.52
CRNDE-214ENST00000637011 ARHGAP35Q9NRY4 1499 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms