RNA–Protein interactions for RNA: ENST00000510897.6

LINC00964-202, long intergenic non-protein coding RNA 964, humanhuman

TSL 1 (best) BASIC

Gene LINC00964, Length 3,534 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00964-202ENST00000510897 NISCHQ9Y2I1 1504 aa16.14■□□□□ 0.17
LINC00964-202ENST00000510897 SHROOM4Q9ULL8 1493 aa13.97□□□□□ -0.17
LINC00964-202ENST00000510897 MYO15BQ96JP2 1530 aa13.94□□□□□ -0.18
LINC00964-202ENST00000510897 HRCP23327 699 aa13.94□□□□□ -0.18
LINC00964-202ENST00000510897 SUPT5HO00267 1087 aaKnown RBP13.8□□□□□ -0.2
LINC00964-202ENST00000510897 ZCCHC6Q5VYS8 1495 aaKnown RBP13.77□□□□□ -0.21
LINC00964-202ENST00000510897 CHIC1Q5VXU3 224 aa13.71□□□□□ -0.21
LINC00964-202ENST00000510897 PPARGC1BQ86YN6 1023 aaKnown RBP13.65□□□□□ -0.22
LINC00964-202ENST00000510897 PCGF6Q9BYE7 350 aa13.6□□□□□ -0.23
LINC00964-202ENST00000510897 CCDC180Q9P1Z9 1646 aa13.55□□□□□ -0.24
LINC00964-202ENST00000510897 DCAF1Q9Y4B6 1507 aa13.55□□□□□ -0.24
LINC00964-202ENST00000510897 LOC105371045A0A1W2PR82 267 aa13.32□□□□□ -0.28
LINC00964-202ENST00000510897 TRIM26Q12899 539 aaPredicted RBP13.24□□□□□ -0.29
LINC00964-202ENST00000510897 SCAF1Q9H7N4 1312 aaKnown RBP13.16□□□□□ -0.3
LINC00964-202ENST00000510897 PELP1Q8IZL8 1130 aaKnown RBP13.14□□□□□ -0.31
LINC00964-202ENST00000510897 ABCC9O60706 1549 aa13.09□□□□□ -0.31
LINC00964-202ENST00000510897 ZEB1P37275 1124 aaPredicted RBP13.03□□□□□ -0.32
LINC00964-202ENST00000510897 DCAF8L2P0C7V8 631 aa13.01□□□□□ -0.33
LINC00964-202ENST00000510897 RSF1Q96T23 1441 aaPredicted RBP12.92□□□□□ -0.34
LINC00964-202ENST00000510897 RB1CC1Q8TDY2 1594 aa12.92□□□□□ -0.34
LINC00964-202ENST00000510897 ACIN1Q9UKV3 1341 aaKnown RBP12.8□□□□□ -0.36
LINC00964-202ENST00000510897 NEUROD1Q13562 356 aa12.8□□□□□ -0.36
LINC00964-202ENST00000510897 TRIM41Q8WV44 630 aa12.79□□□□□ -0.36
LINC00964-202ENST00000510897 SCRIBQ14160 1630 aa12.77□□□□□ -0.37
LINC00964-202ENST00000510897 FAM9AQ8IZU1 332 aaPredicted RBP12.73□□□□□ -0.37
LINC00964-202ENST00000510897 EIF4G1Q04637 1599 aaKnown RBP12.7□□□□□ -0.38
LINC00964-202ENST00000510897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.67□□□□□ -0.38
LINC00964-202ENST00000510897 GTF3C3Q9Y5Q9 886 aa12.65□□□□□ -0.39
LINC00964-202ENST00000510897 EHMT2Q96KQ7 1210 aa12.62□□□□□ -0.39
LINC00964-202ENST00000510897 CECR2Q9BXF3 1484 aa12.61□□□□□ -0.39
LINC00964-202ENST00000510897 MROH2BQ7Z745 1585 aa12.61□□□□□ -0.39
LINC00964-202ENST00000510897 DIEXFQ68CQ4 756 aaKnown RBP12.59□□□□□ -0.39
LINC00964-202ENST00000510897 WIZO95785 1651 aa12.59□□□□□ -0.39
LINC00964-202ENST00000510897 WRNQ14191 1432 aaPredicted RBP eCLIP12.57□□□□□ -0.4
LINC00964-202ENST00000510897 CCER1Q8TC90 406 aaPredicted RBP12.55□□□□□ -0.4
LINC00964-202ENST00000510897 MYT1Q01538 1121 aa12.54□□□□□ -0.4
LINC00964-202ENST00000510897 BAZ1AQ9NRL2 1556 aaPredicted RBP12.52□□□□□ -0.41
LINC00964-202ENST00000510897 CENPBP07199 599 aaPredicted RBP12.5□□□□□ -0.41
LINC00964-202ENST00000510897 NACADO15069 1562 aa12.46□□□□□ -0.41
LINC00964-202ENST00000510897 CEP162Q5TB80 1403 aa12.43□□□□□ -0.42
LINC00964-202ENST00000510897 CCDC88BA6NC98 1476 aa12.43□□□□□ -0.42
LINC00964-202ENST00000510897 ABCC8Q09428 1581 aa12.43□□□□□ -0.42
LINC00964-202ENST00000510897 ZNF316A6NFI3 1004 aaPredicted RBP12.4□□□□□ -0.42
LINC00964-202ENST00000510897 TNIKQ9UKE5 1360 aa12.36□□□□□ -0.43
LINC00964-202ENST00000510897 SOGA1O94964 1423 aa12.35□□□□□ -0.43
LINC00964-202ENST00000510897 MIER1Q8N108 512 aa12.34□□□□□ -0.43
LINC00964-202ENST00000510897 TOP2AP11388 1531 aaKnown RBP12.34□□□□□ -0.43
LINC00964-202ENST00000510897 SMARCA2P51531 1590 aa12.33□□□□□ -0.44
LINC00964-202ENST00000510897 RUSC2Q8N2Y8 1516 aa12.32□□□□□ -0.44
LINC00964-202ENST00000510897 TTBK1Q5TCY1 1321 aaPredicted RBP12.32□□□□□ -0.44
LINC00964-202ENST00000510897 YTHDC1Q96MU7 727 aaKnown RBP12.29□□□□□ -0.44
LINC00964-202ENST00000510897 SMARCA4P51532 1647 aa12.24□□□□□ -0.45
LINC00964-202ENST00000510897 EEA1Q15075 1411 aa12.23□□□□□ -0.45
LINC00964-202ENST00000510897 GOLGA3Q08378 1498 aa12.21□□□□□ -0.45
LINC00964-202ENST00000510897 KIF21BO75037 1637 aa12.18□□□□□ -0.46
LINC00964-202ENST00000510897 CSRNP3Q8WYN3 585 aa12.18□□□□□ -0.46
LINC00964-202ENST00000510897 SUPT16HQ9Y5B9 1047 aaKnown RBP12.13□□□□□ -0.47
LINC00964-202ENST00000510897 UNC13AQ9UPW8 1703 aa12.13□□□□□ -0.47
LINC00964-202ENST00000510897 SYNJ1O43426 1573 aa12.12□□□□□ -0.47
LINC00964-202ENST00000510897 CLIP1P30622 1438 aa12.12□□□□□ -0.47
LINC00964-202ENST00000510897 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
LINC00964-202ENST00000510897 VPS8Q8N3P4 1428 aa12.11□□□□□ -0.47
LINC00964-202ENST00000510897 CEP164Q9UPV0 1460 aa12.09□□□□□ -0.47
LINC00964-202ENST00000510897 UBTFP17480 764 aaKnown RBP12.09□□□□□ -0.47
LINC00964-202ENST00000510897 DHX57Q6P158 1386 aaKnown RBP12.07□□□□□ -0.48
LINC00964-202ENST00000510897 TSHZ2Q9NRE2 1034 aa12.07□□□□□ -0.48
LINC00964-202ENST00000510897 CLSPNQ9HAW4 1339 aa12.05□□□□□ -0.48
LINC00964-202ENST00000510897 BAZ1BQ9UIG0 1483 aaKnown RBP12.05□□□□□ -0.48
LINC00964-202ENST00000510897 RAPGEF2Q9Y4G8 1499 aa12.03□□□□□ -0.48
LINC00964-202ENST00000510897 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
LINC00964-202ENST00000510897 ANP32EQ9BTT0 268 aa11.98□□□□□ -0.49
LINC00964-202ENST00000510897 CUX2O14529 1486 aa11.97□□□□□ -0.49
LINC00964-202ENST00000510897 ARAP1Q96P48 1450 aa11.96□□□□□ -0.49
LINC00964-202ENST00000510897 RRBP1Q9P2E9 1410 aaKnown RBP11.93□□□□□ -0.5
LINC00964-202ENST00000510897 KCNH8Q96L42 1107 aa11.92□□□□□ -0.5
LINC00964-202ENST00000510897 MAPKBP1O60336 1514 aa11.9□□□□□ -0.5
LINC00964-202ENST00000510897 BICRAQ9NZM4 1560 aa11.9□□□□□ -0.5
LINC00964-202ENST00000510897 TOP2BQ02880 1626 aa11.89□□□□□ -0.51
LINC00964-202ENST00000510897 BCL11AQ9H165 835 aa11.89□□□□□ -0.51
LINC00964-202ENST00000510897 ERICH3Q5RHP9 1530 aa11.88□□□□□ -0.51
LINC00964-202ENST00000510897 BIVM-ERCC5R4GMW8 1640 aa11.88□□□□□ -0.51
LINC00964-202ENST00000510897 KANK4Q5T7N3 995 aaPredicted RBP11.87□□□□□ -0.51
LINC00964-202ENST00000510897 PRXQ9BXM0 1461 aa11.87□□□□□ -0.51
LINC00964-202ENST00000510897 APLP2Q06481 763 aa11.8□□□□□ -0.52
LINC00964-202ENST00000510897 WDR97A6NE52 1622 aa11.79□□□□□ -0.52
LINC00964-202ENST00000510897 ATAD2BQ9ULI0 1458 aa11.79□□□□□ -0.52
LINC00964-202ENST00000510897 RANGAP1P46060 587 aaPredicted RBP11.77□□□□□ -0.53
LINC00964-202ENST00000510897 CCNB3Q8WWL7 1395 aa11.77□□□□□ -0.53
LINC00964-202ENST00000510897 ARHGAP35Q9NRY4 1499 aa11.76□□□□□ -0.53
LINC00964-202ENST00000510897 BCANQ96GW7 911 aa11.76□□□□□ -0.53
LINC00964-202ENST00000510897 RAB3GAP2Q9H2M9 1393 aa11.75□□□□□ -0.53
LINC00964-202ENST00000510897 RBM19Q9Y4C8 960 aaKnown RBP11.74□□□□□ -0.53
LINC00964-202ENST00000510897 FKBP8Q14318 412 aa11.74□□□□□ -0.53
LINC00964-202ENST00000510897 PPP1R15AO75807 674 aaPredicted RBP11.73□□□□□ -0.53
LINC00964-202ENST00000510897 MSH5O43196 834 aa11.72□□□□□ -0.53
LINC00964-202ENST00000510897 CUX1P39880 1505 aa11.71□□□□□ -0.53
LINC00964-202ENST00000510897 TIAM1Q13009 1591 aa11.7□□□□□ -0.54
LINC00964-202ENST00000510897 MAP3K1Q13233 1512 aa11.68□□□□□ -0.54
LINC00964-202ENST00000510897 PABPN1Q86U42 306 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC00964-202ENST00000510897 DDX10Q13206 875 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms