RNA–Protein interactions for RNA: ENST00000394549.6

DNASE1L3-201, Transcript of deoxyribonuclease 1 like 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DNASE1L3, Length 1,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNASE1L3-201ENST00000394549 AEBP2Q6ZN18 517 aaPredicted RBP22.5■■□□□ 1.19
DNASE1L3-201ENST00000394549 CHIC1Q5VXU3 224 aa22.21■■□□□ 1.15
DNASE1L3-201ENST00000394549 PHF23Q9BUL5 403 aaPredicted RBP19.53■□□□□ 0.72
DNASE1L3-201ENST00000394549 SENP3Q9H4L4 574 aaPredicted RBP19.11■□□□□ 0.65
DNASE1L3-201ENST00000394549 PLPPR3Q6T4P5 718 aa18.17■□□□□ 0.5
DNASE1L3-201ENST00000394549 NISCHQ9Y2I1 1504 aa18.09■□□□□ 0.49
DNASE1L3-201ENST00000394549 FOXD1Q16676 465 aa17.69■□□□□ 0.42
DNASE1L3-201ENST00000394549 ADRA2BP18089 450 aa17.23■□□□□ 0.35
DNASE1L3-201ENST00000394549 PPP6R1Q9UPN7 881 aa17.19■□□□□ 0.34
DNASE1L3-201ENST00000394549 PIAS4Q8N2W9 510 aaPredicted RBP16.8■□□□□ 0.28
DNASE1L3-201ENST00000394549 ABCC9O60706 1549 aa16.28■□□□□ 0.2
DNASE1L3-201ENST00000394549 MSH5O43196 834 aa16.26■□□□□ 0.19
DNASE1L3-201ENST00000394549 CCDC180Q9P1Z9 1646 aa16.13■□□□□ 0.17
DNASE1L3-201ENST00000394549 PPP4R3CPQ6ZMV5 832 aa16.04■□□□□ 0.16
DNASE1L3-201ENST00000394549 KCNA4P22459 653 aa15.9■□□□□ 0.14
DNASE1L3-201ENST00000394549 SCAF1Q9H7N4 1312 aaKnown RBP15.81■□□□□ 0.12
DNASE1L3-201ENST00000394549 NCBP3Q53F19 620 aaKnown RBP15.73■□□□□ 0.11
DNASE1L3-201ENST00000394549 MAPK8IP2Q13387 824 aaPredicted RBP15.57■□□□□ 0.08
DNASE1L3-201ENST00000394549 CNKSR2Q8WXI2 1034 aa15.54■□□□□ 0.08
DNASE1L3-201ENST00000394549 NPM3O75607 178 aaKnown RBP15.43■□□□□ 0.06
DNASE1L3-201ENST00000394549 DNAJC5BQ9UF47 199 aa15.42■□□□□ 0.06
DNASE1L3-201ENST00000394549 RB1CC1Q8TDY2 1594 aa15.37■□□□□ 0.05
DNASE1L3-201ENST00000394549 NACADO15069 1562 aa15.28■□□□□ 0.04
DNASE1L3-201ENST00000394549 DCAF8L2P0C7V8 631 aa15.27■□□□□ 0.04
DNASE1L3-201ENST00000394549 DMRT2Q9Y5R5 561 aa15.25■□□□□ 0.03
DNASE1L3-201ENST00000394549 SLC4A1APQ9BWU0 796 aaKnown RBP15.22■□□□□ 0.03
DNASE1L3-201ENST00000394549 PABPN1Q86U42 306 aaKnown RBP eCLIP15.2■□□□□ 0.02
DNASE1L3-201ENST00000394549 RNF216Q9NWF9 866 aaPredicted RBP15.16■□□□□ 0.02
DNASE1L3-201ENST00000394549 EHMT2Q96KQ7 1210 aa15.09■□□□□ 0.01
DNASE1L3-201ENST00000394549 UNC13AQ9UPW8 1703 aa15.08■□□□□ 0
DNASE1L3-201ENST00000394549 MYO15BQ96JP2 1530 aa15.07■□□□□ 0
DNASE1L3-201ENST00000394549 BICRAQ9NZM4 1560 aa15.07■□□□□ 0
DNASE1L3-201ENST00000394549 HOXD11P31277 338 aaPredicted RBP15.01□□□□□ -0.01
DNASE1L3-201ENST00000394549 ZCCHC6Q5VYS8 1495 aaKnown RBP15□□□□□ -0.01
DNASE1L3-201ENST00000394549 DCAF1Q9Y4B6 1507 aa14.89□□□□□ -0.03
DNASE1L3-201ENST00000394549 SCRIBQ14160 1630 aa14.79□□□□□ -0.04
DNASE1L3-201ENST00000394549 DCAF8L1A6NGE4 600 aa14.76□□□□□ -0.05
DNASE1L3-201ENST00000394549 CSRNP3Q8WYN3 585 aa14.71□□□□□ -0.05
DNASE1L3-201ENST00000394549 SHROOM4Q9ULL8 1493 aa14.68□□□□□ -0.06
DNASE1L3-201ENST00000394549 CC2D2AQ9P2K1 1620 aa14.66□□□□□ -0.06
DNASE1L3-201ENST00000394549 EIF4G1Q04637 1599 aaKnown RBP14.63□□□□□ -0.07
DNASE1L3-201ENST00000394549 CECR2Q9BXF3 1484 aa14.63□□□□□ -0.07
DNASE1L3-201ENST00000394549 ZBTB22O15209 634 aa14.58□□□□□ -0.08
DNASE1L3-201ENST00000394549 FOXD4L1Q9NU39 408 aa14.58□□□□□ -0.08
DNASE1L3-201ENST00000394549 SLC4A2P04920 1241 aa14.49□□□□□ -0.09
DNASE1L3-201ENST00000394549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.43□□□□□ -0.1
DNASE1L3-201ENST00000394549 POTEDQ86YR6 584 aa14.42□□□□□ -0.1
DNASE1L3-201ENST00000394549 MYCNP04198 464 aaPredicted RBP14.27□□□□□ -0.13
DNASE1L3-201ENST00000394549 NCAPD3P42695 1498 aa14.18□□□□□ -0.14
DNASE1L3-201ENST00000394549 ATAD2BQ9ULI0 1458 aa14.15□□□□□ -0.14
DNASE1L3-201ENST00000394549 U3KPZ7 1027 aaPredicted RBP14.13□□□□□ -0.15
DNASE1L3-201ENST00000394549 SMARCA4P51532 1647 aa14.09□□□□□ -0.15
DNASE1L3-201ENST00000394549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.08□□□□□ -0.16
DNASE1L3-201ENST00000394549 HNRNPUL2Q1KMD3 747 aaKnown RBP14.08□□□□□ -0.16
DNASE1L3-201ENST00000394549 SAMD1Q6SPF0 538 aaPredicted RBP14.03□□□□□ -0.16
DNASE1L3-201ENST00000394549 DNAJC5Q9H3Z4 198 aa14.03□□□□□ -0.16
DNASE1L3-201ENST00000394549 NESP48681 1621 aa14.03□□□□□ -0.16
DNASE1L3-201ENST00000394549 HMGXB3Q12766 1538 aa14.02□□□□□ -0.16
DNASE1L3-201ENST00000394549 ATXN8OSP0DMR3 200 aa14.02□□□□□ -0.17
DNASE1L3-201ENST00000394549 SMARCA2P51531 1590 aa14.01□□□□□ -0.17
DNASE1L3-201ENST00000394549 MROH2BQ7Z745 1585 aa14□□□□□ -0.17
DNASE1L3-201ENST00000394549 BAZ1AQ9NRL2 1556 aaPredicted RBP13.98□□□□□ -0.17
DNASE1L3-201ENST00000394549 ERCC6Q03468 1493 aa13.95□□□□□ -0.18
DNASE1L3-201ENST00000394549 BAZ1BQ9UIG0 1483 aaKnown RBP13.95□□□□□ -0.18
DNASE1L3-201ENST00000394549 PEG3Q9GZU2 1588 aa13.95□□□□□ -0.18
DNASE1L3-201ENST00000394549 CUX2O14529 1486 aa13.93□□□□□ -0.18
DNASE1L3-201ENST00000394549 RNF39Q9H2S5 420 aa13.91□□□□□ -0.18
DNASE1L3-201ENST00000394549 APLP2Q06481 763 aa13.9□□□□□ -0.18
DNASE1L3-201ENST00000394549 ATF5Q9Y2D1 282 aaPredicted RBP13.85□□□□□ -0.19
DNASE1L3-201ENST00000394549 THOC2Q8NI27 1593 aaKnown RBP13.81□□□□□ -0.2
DNASE1L3-201ENST00000394549 C1QBPQ07021 282 aaKnown RBP13.79□□□□□ -0.2
DNASE1L3-201ENST00000394549 WIZO95785 1651 aa13.79□□□□□ -0.2
DNASE1L3-201ENST00000394549 LAMC3Q9Y6N6 1575 aa13.78□□□□□ -0.2
DNASE1L3-201ENST00000394549 KIF21AQ7Z4S6 1674 aa13.75□□□□□ -0.21
DNASE1L3-201ENST00000394549 CADPSQ9ULU8 1353 aa13.73□□□□□ -0.21
DNASE1L3-201ENST00000394549 CAPN15O75808 1086 aa13.71□□□□□ -0.21
DNASE1L3-201ENST00000394549 PDS5BQ9NTI5 1447 aa13.71□□□□□ -0.22
DNASE1L3-201ENST00000394549 TRHP20396 242 aaPredicted RBP13.7□□□□□ -0.22
DNASE1L3-201ENST00000394549 SPINK5Q9NQ38 1064 aaPredicted RBP13.7□□□□□ -0.22
DNASE1L3-201ENST00000394549 RSF1Q96T23 1441 aaPredicted RBP13.7□□□□□ -0.22
DNASE1L3-201ENST00000394549 ZNF219Q9P2Y4 722 aaPredicted RBP13.65□□□□□ -0.22
DNASE1L3-201ENST00000394549 MRC2Q9UBG0 1479 aa13.62□□□□□ -0.23
DNASE1L3-201ENST00000394549 WDR62O43379 1518 aa13.59□□□□□ -0.23
DNASE1L3-201ENST00000394549 CFTRP13569 1480 aa13.59□□□□□ -0.23
DNASE1L3-201ENST00000394549 FANCD2Q9BXW9 1451 aa13.58□□□□□ -0.24
DNASE1L3-201ENST00000394549 TOP2AP11388 1531 aaKnown RBP13.57□□□□□ -0.24
DNASE1L3-201ENST00000394549 CEP164Q9UPV0 1460 aa13.55□□□□□ -0.24
DNASE1L3-201ENST00000394549 URB2Q14146 1524 aaKnown RBP13.52□□□□□ -0.25
DNASE1L3-201ENST00000394549 CACNB1Q02641 598 aaPredicted RBP13.51□□□□□ -0.25
DNASE1L3-201ENST00000394549 POLA2Q14181 598 aa13.49□□□□□ -0.25
DNASE1L3-201ENST00000394549 CCDC88BA6NC98 1476 aa13.48□□□□□ -0.25
DNASE1L3-201ENST00000394549 ABCB7O75027 752 aa13.45□□□□□ -0.26
DNASE1L3-201ENST00000394549 TRIM41Q8WV44 630 aa13.4□□□□□ -0.26
DNASE1L3-201ENST00000394549 ZNF608Q9ULD9 1512 aaPredicted RBP13.37□□□□□ -0.27
DNASE1L3-201ENST00000394549 FKBP8Q14318 412 aa13.36□□□□□ -0.27
DNASE1L3-201ENST00000394549 FBLN2P98095 1184 aa13.34□□□□□ -0.27
DNASE1L3-201ENST00000394549 DSG3P32926 999 aa13.33□□□□□ -0.28
DNASE1L3-201ENST00000394549 OSCARQ8IYS5 282 aa13.33□□□□□ -0.28
DNASE1L3-201ENST00000394549 TOPBP1Q92547 1522 aa13.33□□□□□ -0.28
DNASE1L3-201ENST00000394549 PRDM2Q13029 1718 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms