Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 HIGD1B-203ENST00000587021 457 ntTSL 2 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 AC100814.1-201ENST00000606963 623 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 5_8S_rRNA.2-201ENST00000612732 151 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 AL731556.2-201ENST00000615610 770 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 AC009093.6-201ENST00000622268 553 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SNX18Q96RF0 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SNX18Q96RF0 DLD-205ENST00000440410 1993 ntTSL 2 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SNX18Q96RF0 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SNX18Q96RF0 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
SNX18Q96RF0 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SNX18Q96RF0 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 AC006058.1-201ENST00000568686 5067 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SNX18Q96RF0 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SNX18Q96RF0 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
SNX18Q96RF0 AC138627.1-203ENST00000641872 1680 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SNX18Q96RF0 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SNX18Q96RF0 LDHB-201ENST00000350669 1303 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SNX18Q96RF0 NR1I3-204ENST00000367982 1322 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SNX18Q96RF0 AC002540.1-201ENST00000625023 1349 ntBASIC7.25□□□□□ -1.25
SNX18Q96RF0 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SNX18Q96RF0 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SNX18Q96RF0 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SNX18Q96RF0 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
SNX18Q96RF0 EPS15P1-202ENST00000459691 2071 ntBASIC7.24□□□□□ -1.25
SNX18Q96RF0 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SNX18Q96RF0 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SNX18Q96RF0 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SNX18Q96RF0 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SNX18Q96RF0 LINC00662-203ENST00000586954 2254 ntTSL 2 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 NBPF25P-201ENST00000606775 2019 ntBASIC7.24□□□□□ -1.25
SNX18Q96RF0 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SNX18Q96RF0 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 MFAP3L-202ENST00000393702 1505 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SNX18Q96RF0 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SNX18Q96RF0 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 AL023755.1-203ENST00000422253 519 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SNX18Q96RF0 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SNX18Q96RF0 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 RPL3P8-201ENST00000432928 1191 ntBASIC7.24□□□□□ -1.25
SNX18Q96RF0 RPL21P88-201ENST00000436649 436 ntBASIC7.24□□□□□ -1.25
SNX18Q96RF0 AC105942.1-202ENST00000438509 952 ntTSL 3 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 LINC01432-201ENST00000449427 677 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SNX18Q96RF0 RPS29P16-201ENST00000452798 171 ntBASIC7.24□□□□□ -1.25
SNX18Q96RF0 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SNX18Q96RF0 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 KRT18P54-201ENST00000513396 748 ntBASIC7.24□□□□□ -1.25
SNX18Q96RF0 LINC02021-203ENST00000514145 569 ntTSL 4 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 ASPH-206ENST00000517661 809 ntTSL 2 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 SNRPCP14-201ENST00000524498 205 ntBASIC7.24□□□□□ -1.25
SNX18Q96RF0 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 AC009997.1-201ENST00000557862 129 ntBASIC7.24□□□□□ -1.25
SNX18Q96RF0 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 AC090287.1-201ENST00000578374 291 ntBASIC7.24□□□□□ -1.25
SNX18Q96RF0 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 OR13Z2P-201ENST00000606338 555 ntBASIC7.24□□□□□ -1.25
SNX18Q96RF0 AL117372.1-201ENST00000613711 459 ntTSL 4 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 Metazoa_SRP.20-201ENST00000619896 275 ntBASIC7.24□□□□□ -1.25
SNX18Q96RF0 SMG7-216ENST00000638826 219 ntTSL 2 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SNX18Q96RF0 HIPK1-208ENST00000426820 4112 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SNX18Q96RF0 AC104083.1-201ENST00000569449 2615 ntBASIC7.24□□□□□ -1.25
SNX18Q96RF0 PARP1P1-201ENST00000413631 3026 ntBASIC7.24□□□□□ -1.25
SNX18Q96RF0 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SNX18Q96RF0 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SNX18Q96RF0 MSL3-203ENST00000361672 2256 ntTSL 2 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 AC015871.4-201ENST00000624650 2260 ntBASIC7.24□□□□□ -1.25
SNX18Q96RF0 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
SNX18Q96RF0 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SNX18Q96RF0 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SNX18Q96RF0 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SNX18Q96RF0 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SNX18Q96RF0 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 EEF1A1P11-201ENST00000415278 1389 ntBASIC7.23□□□□□ -1.25
SNX18Q96RF0 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SNX18Q96RF0 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SNX18Q96RF0 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SNX18Q96RF0 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
SNX18Q96RF0 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms