RNA–Protein interactions for RNA: ENST00000615352.4

SEM1-215, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 5 BASIC

Gene SEM1, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-215ENST00000615352 NISCHQ9Y2I1 1504 aa16.73■□□□□ 0.27
SEM1-215ENST00000615352 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
SEM1-215ENST00000615352 SHROOM4Q9ULL8 1493 aa14.22□□□□□ -0.13
SEM1-215ENST00000615352 ZCCHC6Q5VYS8 1495 aaKnown RBP14.13□□□□□ -0.15
SEM1-215ENST00000615352 DCAF8L2P0C7V8 631 aa13.92□□□□□ -0.18
SEM1-215ENST00000615352 SUPT5HO00267 1087 aaKnown RBP13.9□□□□□ -0.18
SEM1-215ENST00000615352 DCAF1Q9Y4B6 1507 aa13.71□□□□□ -0.21
SEM1-215ENST00000615352 CHIC1Q5VXU3 224 aa13.48□□□□□ -0.25
SEM1-215ENST00000615352 MYO15BQ96JP2 1530 aa13.42□□□□□ -0.26
SEM1-215ENST00000615352 SCRIBQ14160 1630 aa13.36□□□□□ -0.27
SEM1-215ENST00000615352 ABCC9O60706 1549 aa13.31□□□□□ -0.28
SEM1-215ENST00000615352 RSF1Q96T23 1441 aaPredicted RBP13.22□□□□□ -0.29
SEM1-215ENST00000615352 NACADO15069 1562 aa13.19□□□□□ -0.3
SEM1-215ENST00000615352 LOC105371045A0A1W2PR82 267 aa13.1□□□□□ -0.31
SEM1-215ENST00000615352 CECR2Q9BXF3 1484 aa13.1□□□□□ -0.31
SEM1-215ENST00000615352 RB1CC1Q8TDY2 1594 aa13.06□□□□□ -0.32
SEM1-215ENST00000615352 MROH2BQ7Z745 1585 aa13.03□□□□□ -0.32
SEM1-215ENST00000615352 PCGF6Q9BYE7 350 aa12.95□□□□□ -0.34
SEM1-215ENST00000615352 WIZO95785 1651 aa12.95□□□□□ -0.34
SEM1-215ENST00000615352 TRIM41Q8WV44 630 aa12.93□□□□□ -0.34
SEM1-215ENST00000615352 HRCP23327 699 aa12.87□□□□□ -0.35
SEM1-215ENST00000615352 FAM9AQ8IZU1 332 aaPredicted RBP12.85□□□□□ -0.35
SEM1-215ENST00000615352 UNC13AQ9UPW8 1703 aa12.84□□□□□ -0.35
SEM1-215ENST00000615352 BAZ1AQ9NRL2 1556 aaPredicted RBP12.83□□□□□ -0.35
SEM1-215ENST00000615352 SMARCA4P51532 1647 aa12.76□□□□□ -0.37
SEM1-215ENST00000615352 EHMT2Q96KQ7 1210 aa12.75□□□□□ -0.37
SEM1-215ENST00000615352 PABPN1Q86U42 306 aaKnown RBP eCLIP12.74□□□□□ -0.37
SEM1-215ENST00000615352 EIF4G1Q04637 1599 aaKnown RBP12.72□□□□□ -0.37
SEM1-215ENST00000615352 TOP2AP11388 1531 aaKnown RBP12.71□□□□□ -0.38
SEM1-215ENST00000615352 BICRAQ9NZM4 1560 aa12.7□□□□□ -0.38
SEM1-215ENST00000615352 TRIM26Q12899 539 aaPredicted RBP12.7□□□□□ -0.38
SEM1-215ENST00000615352 CCDC88BA6NC98 1476 aa12.69□□□□□ -0.38
SEM1-215ENST00000615352 PPARGC1BQ86YN6 1023 aaKnown RBP12.67□□□□□ -0.38
SEM1-215ENST00000615352 SMARCA2P51531 1590 aa12.66□□□□□ -0.38
SEM1-215ENST00000615352 ABCC8Q09428 1581 aa12.63□□□□□ -0.39
SEM1-215ENST00000615352 PEG3Q9GZU2 1588 aa12.52□□□□□ -0.41
SEM1-215ENST00000615352 SOGA1O94964 1423 aa12.5□□□□□ -0.41
SEM1-215ENST00000615352 ATAD2BQ9ULI0 1458 aa12.47□□□□□ -0.41
SEM1-215ENST00000615352 RUSC2Q8N2Y8 1516 aa12.46□□□□□ -0.41
SEM1-215ENST00000615352 WRNQ14191 1432 aaPredicted RBP eCLIP12.4□□□□□ -0.42
SEM1-215ENST00000615352 BAZ1BQ9UIG0 1483 aaKnown RBP12.4□□□□□ -0.42
SEM1-215ENST00000615352 CSRNP3Q8WYN3 585 aa12.4□□□□□ -0.43
SEM1-215ENST00000615352 CEP162Q5TB80 1403 aa12.36□□□□□ -0.43
SEM1-215ENST00000615352 SYNJ1O43426 1573 aa12.36□□□□□ -0.43
SEM1-215ENST00000615352 TNIKQ9UKE5 1360 aa12.35□□□□□ -0.43
SEM1-215ENST00000615352 EEA1Q15075 1411 aa12.34□□□□□ -0.43
SEM1-215ENST00000615352 UBTFP17480 764 aaKnown RBP12.33□□□□□ -0.44
SEM1-215ENST00000615352 ZEB1P37275 1124 aaPredicted RBP12.32□□□□□ -0.44
SEM1-215ENST00000615352 TTBK1Q5TCY1 1321 aaPredicted RBP12.3□□□□□ -0.44
SEM1-215ENST00000615352 GOLGA3Q08378 1498 aa12.27□□□□□ -0.44
SEM1-215ENST00000615352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.25□□□□□ -0.45
SEM1-215ENST00000615352 NCAPD3P42695 1498 aa12.23□□□□□ -0.45
SEM1-215ENST00000615352 CEP164Q9UPV0 1460 aa12.21□□□□□ -0.45
SEM1-215ENST00000615352 KIF21BO75037 1637 aa12.2□□□□□ -0.46
SEM1-215ENST00000615352 TOP2BQ02880 1626 aa12.2□□□□□ -0.46
SEM1-215ENST00000615352 HMGXB3Q12766 1538 aa12.2□□□□□ -0.46
SEM1-215ENST00000615352 RAPGEF2Q9Y4G8 1499 aa12.19□□□□□ -0.46
SEM1-215ENST00000615352 CCER1Q8TC90 406 aaPredicted RBP12.16□□□□□ -0.46
SEM1-215ENST00000615352 CLIP1P30622 1438 aa12.15□□□□□ -0.46
SEM1-215ENST00000615352 BIVM-ERCC5R4GMW8 1640 aa12.15□□□□□ -0.46
SEM1-215ENST00000615352 RANGAP1P46060 587 aaPredicted RBP12.13□□□□□ -0.47
SEM1-215ENST00000615352 CUX1P39880 1505 aa12.12□□□□□ -0.47
SEM1-215ENST00000615352 CFTRP13569 1480 aa12.11□□□□□ -0.47
SEM1-215ENST00000615352 VPS8Q8N3P4 1428 aa12.08□□□□□ -0.48
SEM1-215ENST00000615352 PRXQ9BXM0 1461 aa12.07□□□□□ -0.48
SEM1-215ENST00000615352 ERICH3Q5RHP9 1530 aa12.02□□□□□ -0.49
SEM1-215ENST00000615352 HNRNPUL2Q1KMD3 747 aaKnown RBP12.01□□□□□ -0.49
SEM1-215ENST00000615352 KIF27Q86VH2 1401 aa12.01□□□□□ -0.49
SEM1-215ENST00000615352 CADPSQ9ULU8 1353 aa11.99□□□□□ -0.49
SEM1-215ENST00000615352 ARAP1Q96P48 1450 aa11.98□□□□□ -0.49
SEM1-215ENST00000615352 APLP2Q06481 763 aa11.98□□□□□ -0.49
SEM1-215ENST00000615352 CC2D2AQ9P2K1 1620 aa11.97□□□□□ -0.49
SEM1-215ENST00000615352 PRDM2Q13029 1718 aa11.97□□□□□ -0.49
SEM1-215ENST00000615352 KANK4Q5T7N3 995 aaPredicted RBP11.94□□□□□ -0.5
SEM1-215ENST00000615352 IGF1RP08069 1367 aa11.94□□□□□ -0.5
SEM1-215ENST00000615352 CUX2O14529 1486 aa11.93□□□□□ -0.5
SEM1-215ENST00000615352 FGD5Q6ZNL6 1462 aa11.91□□□□□ -0.5
SEM1-215ENST00000615352 ARHGAP35Q9NRY4 1499 aa11.9□□□□□ -0.5
SEM1-215ENST00000615352 DIEXFQ68CQ4 756 aaKnown RBP11.88□□□□□ -0.51
SEM1-215ENST00000615352 FANCD2Q9BXW9 1451 aa11.87□□□□□ -0.51
SEM1-215ENST00000615352 NESP48681 1621 aa11.86□□□□□ -0.51
SEM1-215ENST00000615352 CARMIL1Q5VZK9 1371 aa11.86□□□□□ -0.51
SEM1-215ENST00000615352 RAD54L2Q9Y4B4 1467 aa11.83□□□□□ -0.52
SEM1-215ENST00000615352 ZNF316A6NFI3 1004 aaPredicted RBP11.82□□□□□ -0.52
SEM1-215ENST00000615352 SCAF1Q9H7N4 1312 aaKnown RBP11.81□□□□□ -0.52
SEM1-215ENST00000615352 DNAJC5BQ9UF47 199 aa11.81□□□□□ -0.52
SEM1-215ENST00000615352 RRBP1Q9P2E9 1410 aaKnown RBP11.79□□□□□ -0.52
SEM1-215ENST00000615352 POLA1P09884 1462 aaPredicted RBP11.79□□□□□ -0.52
SEM1-215ENST00000615352 TOPBP1Q92547 1522 aa11.79□□□□□ -0.52
SEM1-215ENST00000615352 DNMBPQ6XZF7 1577 aa11.78□□□□□ -0.52
SEM1-215ENST00000615352 DHX57Q6P158 1386 aaKnown RBP11.76□□□□□ -0.53
SEM1-215ENST00000615352 P3H3Q8IVL6 736 aa11.76□□□□□ -0.53
SEM1-215ENST00000615352 ABCA10Q8WWZ4 1543 aa11.76□□□□□ -0.53
SEM1-215ENST00000615352 CCNB3Q8WWL7 1395 aa11.75□□□□□ -0.53
SEM1-215ENST00000615352 NEUROD1Q13562 356 aa11.74□□□□□ -0.53
SEM1-215ENST00000615352 ITGAEP38570 1179 aa11.73□□□□□ -0.53
SEM1-215ENST00000615352 TIAM1Q13009 1591 aa11.73□□□□□ -0.53
SEM1-215ENST00000615352 URB2Q14146 1524 aaKnown RBP11.72□□□□□ -0.53
SEM1-215ENST00000615352 ACIN1Q9UKV3 1341 aaKnown RBP11.71□□□□□ -0.54
SEM1-215ENST00000615352 MAP3K1Q13233 1512 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms