Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 UCKL1-206ENST00000492660 545 ntTSL 210.5□□□□□ -0.731e-17■■□□□ 12.5
PRPF8Q6P2Q9 TMCO6-205ENST00000505086 811 ntTSL 219.02■□□□□ 0.643e-6■■□□□ 12.5
PRPF8Q6P2Q9 TMCO6-210ENST00000511410 994 ntTSL 216.65■□□□□ 0.263e-6■■□□□ 12.5
PRPF8Q6P2Q9 TM7SF2-205ENST00000525385 1014 ntTSL 516.37■□□□□ 0.219e-9■■□□□ 12.5
PRPF8Q6P2Q9 TM7SF2-207ENST00000526085 570 ntTSL 514.06□□□□□ -0.169e-9■■□□□ 12.5
PRPF8Q6P2Q9 FADS1-213ENST00000539999 405 ntTSL 35.17□□□□□ -1.585e-16■■□□□ 12.5
PRPF8Q6P2Q9 PYGB-203ENST00000471359 726 ntTSL 211.55□□□□□ -0.564e-7■■□□□ 12.5
PRPF8Q6P2Q9 RGL3-210ENST00000566153 2149 ntTSL 214.28□□□□□ -0.123e-7■■□□□ 12.5
PRPF8Q6P2Q9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.12■□□□□ 0.658e-7■■□□□ 12.5
PRPF8Q6P2Q9 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.58□□□□□ -0.48e-7■■□□□ 12.5
PRPF8Q6P2Q9 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC11.85□□□□□ -0.518e-7■■□□□ 12.5
PRPF8Q6P2Q9 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC10.74□□□□□ -0.698e-7■■□□□ 12.5
PRPF8Q6P2Q9 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.728e-7■■□□□ 12.5
PRPF8Q6P2Q9 ENTPD6-215ENST00000471478 991 ntTSL 517.05■□□□□ 0.322e-7■■□□□ 12.5
PRPF8Q6P2Q9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.562e-6■■□□□ 12.5
PRPF8Q6P2Q9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.142e-6■■□□□ 12.5
PRPF8Q6P2Q9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.22e-6■■□□□ 12.5
PRPF8Q6P2Q9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.232e-6■■□□□ 12.5
PRPF8Q6P2Q9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.272e-6■■□□□ 12.5
PRPF8Q6P2Q9 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.372e-6■■□□□ 12.5
PRPF8Q6P2Q9 RNF187-202ENST00000482739 2467 ntTSL 510.56□□□□□ -0.722e-6■■□□□ 12.5
PRPF8Q6P2Q9 CCDC57-207ENST00000419322 2829 ntAPPRIS ALT2 TSL 511.43□□□□□ -0.581e-8■■□□□ 12.5
PRPF8Q6P2Q9 PRPSAP1-202ENST00000423915 549 ntTSL 414.24□□□□□ -0.133e-11■■□□□ 12.5
PRPF8Q6P2Q9 PRPSAP1-209ENST00000494662 572 ntTSL 25.78□□□□□ -1.483e-11■■□□□ 12.5
PRPF8Q6P2Q9 LRRC45-204ENST00000582083 527 ntTSL 314.98□□□□□ -0.014e-7■■□□□ 12.5
PRPF8Q6P2Q9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.757e-14■■□□□ 12.5
PRPF8Q6P2Q9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.06■□□□□ 0.647e-14■■□□□ 12.5
PRPF8Q6P2Q9 PNCK-225ENST00000473680 1232 ntTSL 218.62■□□□□ 0.577e-14■■□□□ 12.5
PRPF8Q6P2Q9 PNCK-208ENST00000422811 771 ntTSL 316.98■□□□□ 0.317e-14■■□□□ 12.5
PRPF8Q6P2Q9 PNCK-221ENST00000466074 1564 ntTSL 216.79■□□□□ 0.287e-14■■□□□ 12.5
PRPF8Q6P2Q9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.177e-14■■□□□ 12.5
PRPF8Q6P2Q9 PNCK-231ENST00000488994 1437 ntTSL 214.87□□□□□ -0.037e-14■■□□□ 12.5
PRPF8Q6P2Q9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.59□□□□□ -0.077e-14■■□□□ 12.5
PRPF8Q6P2Q9 PNCK-222ENST00000466638 1204 ntTSL 213.82□□□□□ -0.27e-14■■□□□ 12.5
PRPF8Q6P2Q9 PNCK-224ENST00000472324 2143 ntTSL 1 (best)13.55□□□□□ -0.247e-14■■□□□ 12.5
PRPF8Q6P2Q9 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.54□□□□□ -0.247e-14■■□□□ 12.5
PRPF8Q6P2Q9 PNCK-214ENST00000439087 754 ntTSL 512.63□□□□□ -0.397e-14■■□□□ 12.5
PRPF8Q6P2Q9 PNCK-232ENST00000489536 836 ntTSL 212.25□□□□□ -0.457e-14■■□□□ 12.5
PRPF8Q6P2Q9 PNCK-211ENST00000433470 717 ntTSL 512.05□□□□□ -0.487e-14■■□□□ 12.5
PRPF8Q6P2Q9 PNCK-205ENST00000411968 557 ntTSL 58.07□□□□□ -1.127e-14■■□□□ 12.5
PRPF8Q6P2Q9 CARD10-204ENST00000433485 578 ntTSL 416.8■□□□□ 0.281e-6■■□□□ 12.5
PRPF8Q6P2Q9 ARHGEF2-209ENST00000470874 372 ntTSL 36.44□□□□□ -1.381e-9■■□□□ 12.5
PRPF8Q6P2Q9 HSD17B4-225ENST00000520216 510 ntTSL 31.58□□□□□ -2.164e-9■■□□□ 12.5
PRPF8Q6P2Q9 SLC43A3-205ENST00000525205 862 ntTSL 39.3□□□□□ -0.922e-6■■□□□ 12.5
PRPF8Q6P2Q9 RTKN-207ENST00000472518 1105 ntTSL 1 (best)12.25□□□□□ -0.452e-18■■□□□ 12.5
PRPF8Q6P2Q9 AGPAT1-207ENST00000476663 746 ntTSL 512.7□□□□□ -0.386e-7■■□□□ 12.5
PRPF8Q6P2Q9 LTBP3-219ENST00000530990 531 ntTSL 210.01□□□□□ -0.812e-7■■□□□ 12.5
PRPF8Q6P2Q9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.248e-8■■□□□ 12.5
PRPF8Q6P2Q9 DDX3X-205ENST00000480592 1001 ntTSL 1 (best)6.9□□□□□ -1.33e-11■■□□□ 12.5
PRPF8Q6P2Q9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.082e-6■■□□□ 12.5
PRPF8Q6P2Q9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.342e-6■■□□□ 12.5
PRPF8Q6P2Q9 CERCAM-205ENST00000420512 887 ntTSL 312.05□□□□□ -0.482e-6■■□□□ 12.5
PRPF8Q6P2Q9 CLK3-216ENST00000564468 929 ntTSL 311.47□□□□□ -0.571e-6■■□□□ 12.5
PRPF8Q6P2Q9 CLK3-218ENST00000566926 646 ntTSL 511.47□□□□□ -0.571e-6■■□□□ 12.5
PRPF8Q6P2Q9 CLK3-206ENST00000562078 2455 ntTSL 29.98□□□□□ -0.811e-6■■□□□ 12.5
PRPF8Q6P2Q9 CLK3-205ENST00000561673 639 ntTSL 38.74□□□□□ -1.011e-6■■□□□ 12.5
PRPF8Q6P2Q9 CLK3-219ENST00000567805 327 ntTSL 34.11□□□□□ -1.751e-6■■□□□ 12.5
PRPF8Q6P2Q9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.18■□□□□ 0.825e-7■■□□□ 12.5
PRPF8Q6P2Q9 RUNX1-216ENST00000482318 1710 ntTSL 1 (best)17.54■□□□□ 0.45e-7■■□□□ 12.5
PRPF8Q6P2Q9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.295e-7■■□□□ 12.5
PRPF8Q6P2Q9 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.365e-7■■□□□ 12.5
PRPF8Q6P2Q9 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.385e-7■■□□□ 12.5
PRPF8Q6P2Q9 SREBF1-211ENST00000476994 591 ntTSL 214.74□□□□□ -0.054e-13■■□□□ 12.5
PRPF8Q6P2Q9 HAGH-206ENST00000565097 1147 ntTSL 218.23■□□□□ 0.519e-7■■□□□ 12.5
PRPF8Q6P2Q9 PRR4-203ENST00000535024 889 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.838e-10■■□□□ 12.5
PRPF8Q6P2Q9 AC018630.6-201ENST00000536668 1618 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.148e-10■■□□□ 12.5
PRPF8Q6P2Q9 RTEL1-206ENST00000425905 664 ntTSL 211.43□□□□□ -0.584e-7■■□□□ 12.5
PRPF8Q6P2Q9 ALDH1L1-211ENST00000473607 2192 ntTSL 1 (best)11.31□□□□□ -0.68e-8■■□□□ 12.5
PRPF8Q6P2Q9 PAM16-213ENST00000575942 806 ntTSL 311.74□□□□□ -0.532e-6■■□□□ 12.5
PRPF8Q6P2Q9 FAM20A-202ENST00000375556 2081 ntTSL 213.5□□□□□ -0.252e-9■■□□□ 12.5
PRPF8Q6P2Q9 GMIP-203ENST00000587205 594 ntTSL 514.25□□□□□ -0.136e-8■■□□□ 12.5
PRPF8Q6P2Q9 GMIP-206ENST00000588171 869 ntTSL 212.74□□□□□ -0.376e-8■■□□□ 12.5
PRPF8Q6P2Q9 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC11.99□□□□□ -0.496e-8■■□□□ 12.5
PRPF8Q6P2Q9 GMIP-207ENST00000591047 747 ntTSL 311.72□□□□□ -0.536e-8■■□□□ 12.5
PRPF8Q6P2Q9 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.616e-8■■□□□ 12.5
PRPF8Q6P2Q9 PI4KA-202ENST00000399213 1636 ntTSL 513.88□□□□□ -0.195e-16■■□□□ 12.5
PRPF8Q6P2Q9 PI4KA-206ENST00000466394 782 ntTSL 511.48□□□□□ -0.573e-6■■□□□ 12.5
PRPF8Q6P2Q9 PI4KA-209ENST00000477245 3026 ntTSL 1 (best)10.02□□□□□ -0.815e-16■■□□□ 12.5
PRPF8Q6P2Q9 PI4KA-207ENST00000466772 3109 ntTSL 29.72□□□□□ -0.855e-16■■□□□ 12.5
PRPF8Q6P2Q9 PI4KA-217ENST00000492581 3925 ntTSL 28.83□□□□□ -15e-16■■□□□ 12.5
PRPF8Q6P2Q9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.611e-6■■□□□ 12.5
PRPF8Q6P2Q9 CAMK1-202ENST00000397277 1423 ntTSL 517.35■□□□□ 0.371e-6■■□□□ 12.5
PRPF8Q6P2Q9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.087e-7■■□□□ 12.5
PRPF8Q6P2Q9 ZFAND2A-202ENST00000397083 852 ntTSL 1 (best)15.52■□□□□ 0.087e-7■■□□□ 12.5
PRPF8Q6P2Q9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.52■□□□□ 0.087e-7■■□□□ 12.5
PRPF8Q6P2Q9 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.811e-8■■□□□ 12.5
PRPF8Q6P2Q9 MLX-206ENST00000588320 2313 ntTSL 511.87□□□□□ -0.511e-6■■□□□ 12.5
PRPF8Q6P2Q9 QPCTL-203ENST00000591606 561 ntTSL 317.94■□□□□ 0.462e-6■■□□□ 12.5
PRPF8Q6P2Q9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.77■□□□□ 0.112e-6■■□□□ 12.5
PRPF8Q6P2Q9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.292e-6■■□□□ 12.5
PRPF8Q6P2Q9 AGFG2-205ENST00000477022 1327 ntTSL 1 (best)17.06■□□□□ 0.323e-10■■□□□ 12.5
PRPF8Q6P2Q9 CCDC130-210ENST00000589096 720 nt16.13■□□□□ 0.173e-9■■□□□ 12.5
PRPF8Q6P2Q9 DOCK2-214ENST00000523351 3777 ntTSL 57.49□□□□□ -1.212e-10■■□□□ 12.5
PRPF8Q6P2Q9 DOCK2-209ENST00000520450 2774 ntTSL 26.74□□□□□ -1.332e-10■■□□□ 12.5
PRPF8Q6P2Q9 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC5.61□□□□□ -1.518e-7■■□□□ 12.5
PRPF8Q6P2Q9 GCDH-206ENST00000587832 791 ntTSL 214.97□□□□□ -0.018e-7■■□□□ 12.5
PRPF8Q6P2Q9 GCDH-213ENST00000590627 1051 ntTSL 1 (best)13.87□□□□□ -0.198e-7■■□□□ 12.5
PRPF8Q6P2Q9 GCDH-208ENST00000588905 562 ntTSL 513.17□□□□□ -0.38e-7■■□□□ 12.5
PRPF8Q6P2Q9 GCDH-209ENST00000589039 523 ntTSL 512.9□□□□□ -0.348e-7■■□□□ 12.5
PRPF8Q6P2Q9 RAB17-209ENST00000466244 937 ntTSL 212.72□□□□□ -0.378e-9■■□□□ 12.5
Retrieved 100 of 73,762 protein–RNA pairs in 465.4 ms