Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AL590240.3-201ENST00000621416 943 ntBASIC8.18□□□□□ -1.1
NID1P14543 AP003400.4-201ENST00000623832 399 ntBASIC8.18□□□□□ -1.1
NID1P14543 KRTAP9-1-202ENST00000634235 351 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
NID1P14543 METTL8-218ENST00000638989 876 ntTSL 5 BASIC8.18□□□□□ -1.1
NID1P14543 METTL8-219ENST00000640734 726 ntTSL 2 BASIC8.18□□□□□ -1.1
NID1P14543 FOLH1B-201ENST00000525540 1974 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NID1P14543 AC136428.3-201ENST00000566387 1990 ntBASIC8.18□□□□□ -1.1
NID1P14543 MSL3P1-201ENST00000438684 2032 ntTSL 2 BASIC8.18□□□□□ -1.1
NID1P14543 ADGRF1-202ENST00000371243 1370 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NID1P14543 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NID1P14543 AL049636.1-201ENST00000455736 1357 ntBASIC8.18□□□□□ -1.1
NID1P14543 TRIM53CP-201ENST00000531490 1354 ntBASIC8.18□□□□□ -1.1
NID1P14543 C3P1-202ENST00000497718 4954 ntBASIC8.18□□□□□ -1.1
NID1P14543 ZEB2-215ENST00000465070 2949 ntTSL 2 BASIC8.18□□□□□ -1.1
NID1P14543 CAST-244ENST00000515663 1473 ntTSL 2 BASIC8.18□□□□□ -1.1
NID1P14543 RBBP9-201ENST00000337227 3861 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NID1P14543 AL359924.1-201ENST00000450451 3127 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NID1P14543 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NID1P14543 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC8.18□□□□□ -1.1
NID1P14543 AC010997.6-201ENST00000623230 1645 ntBASIC8.18□□□□□ -1.1
NID1P14543 ZNF35-202ENST00000396056 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
NID1P14543 CEP128-209ENST00000555265 4662 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
NID1P14543 PRKAR1A-211ENST00000586397 1940 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 MTF2-201ENST00000370298 4125 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 TSC22D1-201ENST00000261489 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 LINC00607-204ENST00000423530 2104 ntTSL 2 BASIC8.17□□□□□ -1.1
NID1P14543 FBXO38-202ENST00000340253 4424 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
NID1P14543 TTC6-203ENST00000476979 2253 ntTSL 2 BASIC8.17□□□□□ -1.1
NID1P14543 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC8.17□□□□□ -1.1
NID1P14543 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
NID1P14543 TTTY8B-201ENST00000328819 531 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 TTTY8-201ENST00000329684 531 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 CLEC2A-201ENST00000339766 732 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 TAC1-202ENST00000346867 1011 ntAPPRIS ALT1 TSL 3 BASIC8.17□□□□□ -1.1
NID1P14543 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 PRR32-201ENST00000371125 1228 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
NID1P14543 LDHAP4-201ENST00000397561 998 ntBASIC8.17□□□□□ -1.1
NID1P14543 BRCC3-206ENST00000399042 954 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
NID1P14543 HMGB3P19-201ENST00000403971 560 ntBASIC8.17□□□□□ -1.1
NID1P14543 GULP1-205ENST00000409805 983 ntTSL 2 BASIC8.17□□□□□ -1.1
NID1P14543 AL023773.2-201ENST00000412173 1005 ntBASIC8.17□□□□□ -1.1
NID1P14543 SETP15-201ENST00000412724 337 ntBASIC8.17□□□□□ -1.1
NID1P14543 OR2L6P-201ENST00000416377 940 ntBASIC8.17□□□□□ -1.1
NID1P14543 TRGV5P-201ENST00000419915 354 ntBASIC8.17□□□□□ -1.1
NID1P14543 GPN3P1-201ENST00000423883 535 ntBASIC8.17□□□□□ -1.1
NID1P14543 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC8.17□□□□□ -1.1
NID1P14543 ZNF965P-201ENST00000432501 817 ntBASIC8.17□□□□□ -1.1
NID1P14543 AC073052.1-201ENST00000440417 714 ntBASIC8.17□□□□□ -1.1
NID1P14543 ZEB1-AS1-203ENST00000441257 585 ntTSL 2 BASIC8.17□□□□□ -1.1
NID1P14543 AC011193.1-202ENST00000441287 323 ntTSL 3 BASIC8.17□□□□□ -1.1
NID1P14543 TMEM97P1-201ENST00000452969 451 ntBASIC8.17□□□□□ -1.1
NID1P14543 AC104619.1-201ENST00000459634 631 ntBASIC8.17□□□□□ -1.1
NID1P14543 RN7SL541P-201ENST00000464317 283 ntBASIC8.17□□□□□ -1.1
NID1P14543 GK-AS1-201ENST00000464659 651 ntTSL 3 BASIC8.17□□□□□ -1.1
NID1P14543 AC027343.3-201ENST00000504494 564 ntTSL 4 BASIC8.17□□□□□ -1.1
NID1P14543 AC104063.1-201ENST00000504840 702 ntTSL 3 BASIC8.17□□□□□ -1.1
NID1P14543 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC8.17□□□□□ -1.1
NID1P14543 ST13P12-201ENST00000508958 1094 ntBASIC8.17□□□□□ -1.1
NID1P14543 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC8.17□□□□□ -1.1
NID1P14543 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC8.17□□□□□ -1.1
NID1P14543 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC8.17□□□□□ -1.1
NID1P14543 OR7E10P-201ENST00000526420 991 ntBASIC8.17□□□□□ -1.1
NID1P14543 AP001973.1-201ENST00000530177 572 ntTSL 4 BASIC8.17□□□□□ -1.1
NID1P14543 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
NID1P14543 RBM4B-207ENST00000531969 769 ntTSL 3 BASIC8.17□□□□□ -1.1
NID1P14543 AP000866.3-201ENST00000534607 433 ntBASIC8.17□□□□□ -1.1
NID1P14543 GABARAPL1-214ENST00000545047 559 ntTSL 4 BASIC8.17□□□□□ -1.1
NID1P14543 TUBA1C-204ENST00000549183 696 ntTSL 2 BASIC8.17□□□□□ -1.1
NID1P14543 AL591767.2-201ENST00000554984 173 ntBASIC8.17□□□□□ -1.1
NID1P14543 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC8.17□□□□□ -1.1
NID1P14543 AC127029.1-201ENST00000560822 237 ntBASIC8.17□□□□□ -1.1
NID1P14543 FRG2KP-201ENST00000565692 971 ntTSL 3 BASIC8.17□□□□□ -1.1
NID1P14543 AC015802.4-201ENST00000589963 578 ntTSL 3 BASIC8.17□□□□□ -1.1
NID1P14543 AC011487.1-202ENST00000597004 551 ntTSL 4 BASIC8.17□□□□□ -1.1
NID1P14543 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 AF131215.7-201ENST00000602443 707 ntBASIC8.17□□□□□ -1.1
NID1P14543 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC8.17□□□□□ -1.1
NID1P14543 AL035417.2-201ENST00000603887 796 ntBASIC8.17□□□□□ -1.1
NID1P14543 AC211469.1-201ENST00000604263 394 ntBASIC8.17□□□□□ -1.1
NID1P14543 RN7SKP299-201ENST00000606679 301 ntBASIC8.17□□□□□ -1.1
NID1P14543 AC245505.3-201ENST00000616788 358 ntBASIC8.17□□□□□ -1.1
NID1P14543 AC103691.1-201ENST00000619654 520 ntBASIC8.17□□□□□ -1.1
NID1P14543 SMCR2_1.1-201ENST00000621493 157 ntBASIC8.17□□□□□ -1.1
NID1P14543 BRCC3-210ENST00000630295 954 ntTSL 5 BASIC8.17□□□□□ -1.1
NID1P14543 LINC00710-219ENST00000635054 938 ntTSL 5 BASIC8.17□□□□□ -1.1
NID1P14543 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC8.17□□□□□ -1.1
NID1P14543 ELAVL4-201ENST00000357083 1442 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 AC092104.1-201ENST00000497346 1441 ntBASIC8.17□□□□□ -1.1
NID1P14543 BRPF1-206ENST00000457855 4308 ntAPPRIS P3 TSL 2 BASIC8.17□□□□□ -1.1
NID1P14543 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 CCR4-201ENST00000330953 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 ELP3-219ENST00000537665 3053 ntTSL 2 BASIC8.17□□□□□ -1.1
NID1P14543 EFCAB10-205ENST00000486180 1550 ntAPPRIS P5 TSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 FRMD7-201ENST00000298542 3198 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 BBS12-201ENST00000314218 3244 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms