RNA–Protein interactions for RNA: ENST00000429949.1

LINC00690-201, long intergenic non-protein coding RNA 690, humanhuman

TSL 1 (best) BASIC

Gene LINC00690, Length 1,365 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00690-201ENST00000429949 AEBP2Q6ZN18 517 aaPredicted RBP28.18■■■□□ 2.1
LINC00690-201ENST00000429949 CHIC1Q5VXU3 224 aa26.44■■□□□ 1.82
LINC00690-201ENST00000429949 SENP3Q9H4L4 574 aaPredicted RBP24.17■■□□□ 1.46
LINC00690-201ENST00000429949 PHF23Q9BUL5 403 aaPredicted RBP23.78■■□□□ 1.4
LINC00690-201ENST00000429949 FOXD1Q16676 465 aa22.53■■□□□ 1.2
LINC00690-201ENST00000429949 POTEDQ86YR6 584 aa21.38■■□□□ 1.01
LINC00690-201ENST00000429949 MSH5O43196 834 aa21.29■■□□□ 1
LINC00690-201ENST00000429949 PIAS4Q8N2W9 510 aaPredicted RBP21.01■□□□□ 0.95
LINC00690-201ENST00000429949 PLPPR3Q6T4P5 718 aa20.98■□□□□ 0.95
LINC00690-201ENST00000429949 PPP6R1Q9UPN7 881 aa20.75■□□□□ 0.91
LINC00690-201ENST00000429949 ADRA2BP18089 450 aa20.7■□□□□ 0.9
LINC00690-201ENST00000429949 MAPK8IP2Q13387 824 aaPredicted RBP19.11■□□□□ 0.65
LINC00690-201ENST00000429949 DMRT2Q9Y5R5 561 aa19.08■□□□□ 0.65
LINC00690-201ENST00000429949 SCAF1Q9H7N4 1312 aaKnown RBP19.01■□□□□ 0.63
LINC00690-201ENST00000429949 CACNB1Q02641 598 aaPredicted RBP18.52■□□□□ 0.55
LINC00690-201ENST00000429949 DCAF8L1A6NGE4 600 aa18.41■□□□□ 0.54
LINC00690-201ENST00000429949 PPP4R3CPQ6ZMV5 832 aa18.33■□□□□ 0.53
LINC00690-201ENST00000429949 HOXD11P31277 338 aaPredicted RBP18.22■□□□□ 0.51
LINC00690-201ENST00000429949 RNF39Q9H2S5 420 aa18.09■□□□□ 0.49
LINC00690-201ENST00000429949 CNKSR2Q8WXI2 1034 aa18.08■□□□□ 0.49
LINC00690-201ENST00000429949 RNF216Q9NWF9 866 aaPredicted RBP18.01■□□□□ 0.47
LINC00690-201ENST00000429949 C1QBPQ07021 282 aaKnown RBP17.83■□□□□ 0.45
LINC00690-201ENST00000429949 DNAJC5BQ9UF47 199 aa17.66■□□□□ 0.42
LINC00690-201ENST00000429949 NCBP3Q53F19 620 aaKnown RBP17.56■□□□□ 0.4
LINC00690-201ENST00000429949 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.43■□□□□ 0.38
LINC00690-201ENST00000429949 NPM3O75607 178 aaKnown RBP17.24■□□□□ 0.35
LINC00690-201ENST00000429949 U3KPZ7 1027 aaPredicted RBP16.96■□□□□ 0.31
LINC00690-201ENST00000429949 CAPN15O75808 1086 aa16.88■□□□□ 0.29
LINC00690-201ENST00000429949 SPINK5Q9NQ38 1064 aaPredicted RBP16.83■□□□□ 0.28
LINC00690-201ENST00000429949 DSG3P32926 999 aa16.81■□□□□ 0.28
LINC00690-201ENST00000429949 POTEHQ6S545 545 aa16.71■□□□□ 0.27
LINC00690-201ENST00000429949 KCNA4P22459 653 aa16.57■□□□□ 0.24
LINC00690-201ENST00000429949 APLP2Q06481 763 aa16.54■□□□□ 0.24
LINC00690-201ENST00000429949 SLC4A2P04920 1241 aa16.53■□□□□ 0.24
LINC00690-201ENST00000429949 TRHP20396 242 aaPredicted RBP16.52■□□□□ 0.24
LINC00690-201ENST00000429949 ZNF219Q9P2Y4 722 aaPredicted RBP16.47■□□□□ 0.23
LINC00690-201ENST00000429949 ABCB7O75027 752 aa16.43■□□□□ 0.22
LINC00690-201ENST00000429949 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.42■□□□□ 0.22
LINC00690-201ENST00000429949 HNRNPUL2Q1KMD3 747 aaKnown RBP16.42■□□□□ 0.22
LINC00690-201ENST00000429949 SAMD1Q6SPF0 538 aaPredicted RBP16.29■□□□□ 0.2
LINC00690-201ENST00000429949 RBM42Q9BTD8 480 aaKnown RBP16.12■□□□□ 0.17
LINC00690-201ENST00000429949 MYCNP04198 464 aaPredicted RBP16■□□□□ 0.15
LINC00690-201ENST00000429949 POLA2Q14181 598 aa15.96■□□□□ 0.15
LINC00690-201ENST00000429949 CHRDL2Q6WN34 429 aa15.87■□□□□ 0.13
LINC00690-201ENST00000429949 ZBTB12Q9Y330 459 aaPredicted RBP15.65■□□□□ 0.1
LINC00690-201ENST00000429949 AKT1S1Q96B36 256 aa15.64■□□□□ 0.09
LINC00690-201ENST00000429949 FOXD4L1Q9NU39 408 aa15.62■□□□□ 0.09
LINC00690-201ENST00000429949 SLC4A1APQ9BWU0 796 aaKnown RBP15.61■□□□□ 0.09
LINC00690-201ENST00000429949 ATF5Q9Y2D1 282 aaPredicted RBP15.6■□□□□ 0.09
LINC00690-201ENST00000429949 SP7Q8TDD2 431 aaPredicted RBP15.49■□□□□ 0.07
LINC00690-201ENST00000429949 REM2Q8IYK8 340 aaPredicted RBP15.48■□□□□ 0.07
LINC00690-201ENST00000429949 OSCARQ8IYS5 282 aa15.47■□□□□ 0.07
LINC00690-201ENST00000429949 PIP4P2Q8N4L2 257 aa15.41■□□□□ 0.06
LINC00690-201ENST00000429949 PITPNM1O00562 1244 aa15.31■□□□□ 0.04
LINC00690-201ENST00000429949 HAX1O00165 279 aa15.28■□□□□ 0.04
LINC00690-201ENST00000429949 FXR2P51116 673 aaKnown RBP eCLIP15.24■□□□□ 0.03
LINC00690-201ENST00000429949 ZBTB22O15209 634 aa15.19■□□□□ 0.02
LINC00690-201ENST00000429949 ATXN8OSP0DMR3 200 aa15.16■□□□□ 0.02
LINC00690-201ENST00000429949 FBLN2P98095 1184 aa15.11■□□□□ 0.01
LINC00690-201ENST00000429949 SPDYE2BA6NHP3 402 aa15.11■□□□□ 0.01
LINC00690-201ENST00000429949 SPDYE6P0CI01 402 aa15.11■□□□□ 0.01
LINC00690-201ENST00000429949 SPDYE2Q495Y8 402 aa15.11■□□□□ 0.01
LINC00690-201ENST00000429949 EVX2Q03828 476 aa14.98□□□□□ -0.01
LINC00690-201ENST00000429949 CLEC11AQ9Y240 323 aa14.97□□□□□ -0.01
LINC00690-201ENST00000429949 SPDYE1Q8NFV5 336 aaPredicted RBP14.96□□□□□ -0.02
LINC00690-201ENST00000429949 PRKAR2AP13861 404 aaKnown RBP14.94□□□□□ -0.02
LINC00690-201ENST00000429949 ZNF692Q9BU19 519 aaPredicted RBP14.87□□□□□ -0.03
LINC00690-201ENST00000429949 MKRN4PQ13434 485 aaPredicted RBP14.85□□□□□ -0.03
LINC00690-201ENST00000429949 SSUH2Q9Y2M2 353 aa14.83□□□□□ -0.04
LINC00690-201ENST00000429949 C19orf67A6NJJ6 358 aa14.77□□□□□ -0.04
LINC00690-201ENST00000429949 EHMT2Q96KQ7 1210 aa14.74□□□□□ -0.05
LINC00690-201ENST00000429949 CHADLQ6NUI6 762 aa14.67□□□□□ -0.06
LINC00690-201ENST00000429949 GABBR2O75899 941 aa14.66□□□□□ -0.06
LINC00690-201ENST00000429949 PRR29P0C7W0 189 aa14.65□□□□□ -0.06
LINC00690-201ENST00000429949 PABPN1Q86U42 306 aaKnown RBP eCLIP14.63□□□□□ -0.07
LINC00690-201ENST00000429949 LHX8Q68G74 356 aa14.53□□□□□ -0.08
LINC00690-201ENST00000429949 CSRNP3Q8WYN3 585 aa14.47□□□□□ -0.09
LINC00690-201ENST00000429949 CD44P16070 742 aaKnown RBP14.45□□□□□ -0.1
LINC00690-201ENST00000429949 FARP1Q9Y4F1 1045 aaPredicted RBP14.42□□□□□ -0.1
LINC00690-201ENST00000429949 CLCN6P51797 869 aa14.34□□□□□ -0.11
LINC00690-201ENST00000429949 POTEIP0CG38 1075 aa14.3□□□□□ -0.12
LINC00690-201ENST00000429949 DCBLD2Q96PD2 775 aa14.24□□□□□ -0.13
LINC00690-201ENST00000429949 PLSCR2Q9NRY7 297 aa14.21□□□□□ -0.14
LINC00690-201ENST00000429949 ZRANB1Q9UGI0 708 aa14.2□□□□□ -0.14
LINC00690-201ENST00000429949 ZNF579Q8NAF0 562 aaKnown RBP14.18□□□□□ -0.14
LINC00690-201ENST00000429949 STAG3Q9UJ98 1225 aa14.18□□□□□ -0.14
LINC00690-201ENST00000429949 CREBZFQ9NS37 354 aa14.14□□□□□ -0.15
LINC00690-201ENST00000429949 PAK3O75914 559 aaPredicted RBP14.05□□□□□ -0.16
LINC00690-201ENST00000429949 GALR2O43603 387 aaPredicted RBP14.04□□□□□ -0.16
LINC00690-201ENST00000429949 SPDYE4A6NLX3 237 aa14.02□□□□□ -0.17
LINC00690-201ENST00000429949 NPM1P06748 294 aaKnown RBP eCLIP13.95□□□□□ -0.18
LINC00690-201ENST00000429949 PHF12Q96QT6 1004 aa13.94□□□□□ -0.18
LINC00690-201ENST00000429949 OTUD5Q96G74 571 aa13.87□□□□□ -0.19
LINC00690-201ENST00000429949 POTEB2H3BUK9 544 aa13.83□□□□□ -0.2
LINC00690-201ENST00000429949 MNX1P50219 401 aaPredicted RBP13.82□□□□□ -0.2
LINC00690-201ENST00000429949 PELP1Q8IZL8 1130 aaKnown RBP13.76□□□□□ -0.21
LINC00690-201ENST00000429949 MS4A3Q96HJ5 214 aa13.74□□□□□ -0.21
LINC00690-201ENST00000429949 METRNQ9UJH8 293 aa13.71□□□□□ -0.21
LINC00690-201ENST00000429949 POTEMA6NI47 508 aa13.71□□□□□ -0.22
LINC00690-201ENST00000429949 ASTLQ6HA08 431 aaPredicted RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 274.6 ms