RNA–Protein interactions for RNA: ENST00000606679.1

RN7SKP299-201, Transcript of RNA, 7SK small nuclear pseudogene 299, humanhuman

BASIC

Gene RN7SKP299, Length 301 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP299-201ENST00000606679 AEBP2Q6ZN18 517 aaPredicted RBP25.72■■□□□ 1.71
RN7SKP299-201ENST00000606679 CHIC1Q5VXU3 224 aa24.82■■□□□ 1.56
RN7SKP299-201ENST00000606679 SENP3Q9H4L4 574 aaPredicted RBP21.93■■□□□ 1.1
RN7SKP299-201ENST00000606679 PHF23Q9BUL5 403 aaPredicted RBP21.77■■□□□ 1.08
RN7SKP299-201ENST00000606679 FOXD1Q16676 465 aa20.36■□□□□ 0.85
RN7SKP299-201ENST00000606679 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
RN7SKP299-201ENST00000606679 PPP6R1Q9UPN7 881 aa19.32■□□□□ 0.68
RN7SKP299-201ENST00000606679 ADRA2BP18089 450 aa19.27■□□□□ 0.68
RN7SKP299-201ENST00000606679 PIAS4Q8N2W9 510 aaPredicted RBP19.11■□□□□ 0.65
RN7SKP299-201ENST00000606679 MSH5O43196 834 aa18.95■□□□□ 0.62
RN7SKP299-201ENST00000606679 POTEDQ86YR6 584 aa17.82■□□□□ 0.44
RN7SKP299-201ENST00000606679 SCAF1Q9H7N4 1312 aaKnown RBP17.71■□□□□ 0.42
RN7SKP299-201ENST00000606679 MAPK8IP2Q13387 824 aaPredicted RBP17.59■□□□□ 0.41
RN7SKP299-201ENST00000606679 PPP4R3CPQ6ZMV5 832 aa17.58■□□□□ 0.4
RN7SKP299-201ENST00000606679 DMRT2Q9Y5R5 561 aa17.44■□□□□ 0.38
RN7SKP299-201ENST00000606679 CNKSR2Q8WXI2 1034 aa17.18■□□□□ 0.34
RN7SKP299-201ENST00000606679 NCBP3Q53F19 620 aaKnown RBP17.05■□□□□ 0.32
RN7SKP299-201ENST00000606679 HOXD11P31277 338 aaPredicted RBP16.96■□□□□ 0.31
RN7SKP299-201ENST00000606679 RNF216Q9NWF9 866 aaPredicted RBP16.93■□□□□ 0.3
RN7SKP299-201ENST00000606679 NPM3O75607 178 aaKnown RBP16.75■□□□□ 0.27
RN7SKP299-201ENST00000606679 KCNA4P22459 653 aa16.75■□□□□ 0.27
RN7SKP299-201ENST00000606679 DCAF8L1A6NGE4 600 aa16.66■□□□□ 0.26
RN7SKP299-201ENST00000606679 DNAJC5BQ9UF47 199 aa16.4■□□□□ 0.22
RN7SKP299-201ENST00000606679 RNF39Q9H2S5 420 aa16.19■□□□□ 0.18
RN7SKP299-201ENST00000606679 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.13■□□□□ 0.17
RN7SKP299-201ENST00000606679 CACNB1Q02641 598 aaPredicted RBP16.01■□□□□ 0.15
RN7SKP299-201ENST00000606679 C1QBPQ07021 282 aaKnown RBP16■□□□□ 0.15
RN7SKP299-201ENST00000606679 SLC4A2P04920 1241 aa15.91■□□□□ 0.14
RN7SKP299-201ENST00000606679 SLC4A1APQ9BWU0 796 aaKnown RBP15.9■□□□□ 0.14
RN7SKP299-201ENST00000606679 U3KPZ7 1027 aaPredicted RBP15.82■□□□□ 0.12
RN7SKP299-201ENST00000606679 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.56■□□□□ 0.08
RN7SKP299-201ENST00000606679 HNRNPUL2Q1KMD3 747 aaKnown RBP15.56■□□□□ 0.08
RN7SKP299-201ENST00000606679 FOXD4L1Q9NU39 408 aa15.54■□□□□ 0.08
RN7SKP299-201ENST00000606679 MYCNP04198 464 aaPredicted RBP15.51■□□□□ 0.07
RN7SKP299-201ENST00000606679 APLP2Q06481 763 aa15.48■□□□□ 0.07
RN7SKP299-201ENST00000606679 SAMD1Q6SPF0 538 aaPredicted RBP15.48■□□□□ 0.07
RN7SKP299-201ENST00000606679 SPINK5Q9NQ38 1064 aaPredicted RBP15.47■□□□□ 0.07
RN7SKP299-201ENST00000606679 CAPN15O75808 1086 aa15.43■□□□□ 0.06
RN7SKP299-201ENST00000606679 ZBTB22O15209 634 aa15.39■□□□□ 0.05
RN7SKP299-201ENST00000606679 ZNF219Q9P2Y4 722 aaPredicted RBP15.3■□□□□ 0.04
RN7SKP299-201ENST00000606679 TRHP20396 242 aaPredicted RBP15.28■□□□□ 0.04
RN7SKP299-201ENST00000606679 DSG3P32926 999 aa15.28■□□□□ 0.04
RN7SKP299-201ENST00000606679 ABCB7O75027 752 aa15.09■□□□□ 0.01
RN7SKP299-201ENST00000606679 ATXN8OSP0DMR3 200 aa15.08■□□□□ 0
RN7SKP299-201ENST00000606679 ATF5Q9Y2D1 282 aaPredicted RBP15.08■□□□□ 0
RN7SKP299-201ENST00000606679 CSRNP3Q8WYN3 585 aa15.05■□□□□ -0
RN7SKP299-201ENST00000606679 EHMT2Q96KQ7 1210 aa15□□□□□ -0.01
RN7SKP299-201ENST00000606679 POLA2Q14181 598 aa14.97□□□□□ -0.01
RN7SKP299-201ENST00000606679 ZBTB12Q9Y330 459 aaPredicted RBP14.73□□□□□ -0.05
RN7SKP299-201ENST00000606679 RBM42Q9BTD8 480 aaKnown RBP14.59□□□□□ -0.07
RN7SKP299-201ENST00000606679 FBLN2P98095 1184 aa14.52□□□□□ -0.09
RN7SKP299-201ENST00000606679 OSCARQ8IYS5 282 aa14.44□□□□□ -0.1
RN7SKP299-201ENST00000606679 MKRN4PQ13434 485 aaPredicted RBP14.42□□□□□ -0.1
RN7SKP299-201ENST00000606679 AKT1S1Q96B36 256 aa14.34□□□□□ -0.11
RN7SKP299-201ENST00000606679 SPDYE2BA6NHP3 402 aa14.3□□□□□ -0.12
RN7SKP299-201ENST00000606679 SPDYE6P0CI01 402 aa14.3□□□□□ -0.12
RN7SKP299-201ENST00000606679 SPDYE2Q495Y8 402 aa14.3□□□□□ -0.12
RN7SKP299-201ENST00000606679 REM2Q8IYK8 340 aaPredicted RBP14.18□□□□□ -0.14
RN7SKP299-201ENST00000606679 ZNF692Q9BU19 519 aaPredicted RBP14.17□□□□□ -0.14
RN7SKP299-201ENST00000606679 SSUH2Q9Y2M2 353 aa14.14□□□□□ -0.15
RN7SKP299-201ENST00000606679 CHRDL2Q6WN34 429 aa14.09□□□□□ -0.15
RN7SKP299-201ENST00000606679 POTEHQ6S545 545 aa14.05□□□□□ -0.16
RN7SKP299-201ENST00000606679 PITPNM1O00562 1244 aa14□□□□□ -0.17
RN7SKP299-201ENST00000606679 PABPN1Q86U42 306 aaKnown RBP eCLIP13.96□□□□□ -0.17
RN7SKP299-201ENST00000606679 SPDYE1Q8NFV5 336 aaPredicted RBP13.96□□□□□ -0.17
RN7SKP299-201ENST00000606679 SPDYE4A6NLX3 237 aa13.94□□□□□ -0.18
RN7SKP299-201ENST00000606679 CLEC11AQ9Y240 323 aa13.87□□□□□ -0.19
RN7SKP299-201ENST00000606679 FXR2P51116 673 aaKnown RBP eCLIP13.85□□□□□ -0.19
RN7SKP299-201ENST00000606679 PIP4P2Q8N4L2 257 aa13.84□□□□□ -0.19
RN7SKP299-201ENST00000606679 PRR29P0C7W0 189 aa13.73□□□□□ -0.21
RN7SKP299-201ENST00000606679 STAG3Q9UJ98 1225 aa13.72□□□□□ -0.21
RN7SKP299-201ENST00000606679 PROM2Q8N271 834 aa13.69□□□□□ -0.22
RN7SKP299-201ENST00000606679 PRKAR2AP13861 404 aaKnown RBP13.65□□□□□ -0.22
RN7SKP299-201ENST00000606679 FKBP8Q14318 412 aa13.61□□□□□ -0.23
RN7SKP299-201ENST00000606679 CHADLQ6NUI6 762 aa13.55□□□□□ -0.24
RN7SKP299-201ENST00000606679 HAX1O00165 279 aa13.49□□□□□ -0.25
RN7SKP299-201ENST00000606679 CREBZFQ9NS37 354 aa13.46□□□□□ -0.25
RN7SKP299-201ENST00000606679 FARP1Q9Y4F1 1045 aaPredicted RBP13.43□□□□□ -0.26
RN7SKP299-201ENST00000606679 C19orf67A6NJJ6 358 aa13.38□□□□□ -0.27
RN7SKP299-201ENST00000606679 SP7Q8TDD2 431 aaPredicted RBP13.35□□□□□ -0.27
RN7SKP299-201ENST00000606679 EVX2Q03828 476 aa13.33□□□□□ -0.28
RN7SKP299-201ENST00000606679 MNX1P50219 401 aaPredicted RBP13.28□□□□□ -0.28
RN7SKP299-201ENST00000606679 FBXO3Q9UK99 471 aa13.28□□□□□ -0.28
RN7SKP299-201ENST00000606679 NPM1P06748 294 aaKnown RBP eCLIP13.27□□□□□ -0.29
RN7SKP299-201ENST00000606679 MIER1Q8N108 512 aa13.27□□□□□ -0.29
RN7SKP299-201ENST00000606679 PLEKHG5O94827 1062 aa13.25□□□□□ -0.29
RN7SKP299-201ENST00000606679 CD44P16070 742 aaKnown RBP13.24□□□□□ -0.29
RN7SKP299-201ENST00000606679 PLCD3Q8N3E9 789 aa13.2□□□□□ -0.3
RN7SKP299-201ENST00000606679 ZRANB1Q9UGI0 708 aa13.12□□□□□ -0.31
RN7SKP299-201ENST00000606679 PAK3O75914 559 aaPredicted RBP13.11□□□□□ -0.31
RN7SKP299-201ENST00000606679 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
RN7SKP299-201ENST00000606679 CLCN6P51797 869 aa13.09□□□□□ -0.31
RN7SKP299-201ENST00000606679 GABBR2O75899 941 aa13.08□□□□□ -0.32
RN7SKP299-201ENST00000606679 ZNF579Q8NAF0 562 aaKnown RBP13.08□□□□□ -0.32
RN7SKP299-201ENST00000606679 VASPP50552 380 aaPredicted RBP13.06□□□□□ -0.32
RN7SKP299-201ENST00000606679 TSPYL2Q9H2G4 693 aaPredicted RBP12.98□□□□□ -0.33
RN7SKP299-201ENST00000606679 NUBP1P53384 320 aa12.97□□□□□ -0.33
RN7SKP299-201ENST00000606679 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
RN7SKP299-201ENST00000606679 PHF12Q96QT6 1004 aa12.94□□□□□ -0.34
RN7SKP299-201ENST00000606679 CCDC61Q9Y6R9 512 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms