RNA–Protein interactions for RNA: ENST00000521755.1

CDKL3-207, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 5 BASIC

Gene CDKL3, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-207ENST00000521755 AEBP2Q6ZN18 517 aaPredicted RBP26.63■■□□□ 1.85
CDKL3-207ENST00000521755 CHIC1Q5VXU3 224 aa25.39■■□□□ 1.66
CDKL3-207ENST00000521755 SENP3Q9H4L4 574 aaPredicted RBP22.72■■□□□ 1.23
CDKL3-207ENST00000521755 PHF23Q9BUL5 403 aaPredicted RBP22.44■■□□□ 1.18
CDKL3-207ENST00000521755 FOXD1Q16676 465 aa21.16■□□□□ 0.98
CDKL3-207ENST00000521755 PLPPR3Q6T4P5 718 aa20.35■□□□□ 0.85
CDKL3-207ENST00000521755 PPP6R1Q9UPN7 881 aa19.84■□□□□ 0.77
CDKL3-207ENST00000521755 PIAS4Q8N2W9 510 aaPredicted RBP19.82■□□□□ 0.76
CDKL3-207ENST00000521755 ADRA2BP18089 450 aa19.81■□□□□ 0.76
CDKL3-207ENST00000521755 MSH5O43196 834 aa19.78■□□□□ 0.76
CDKL3-207ENST00000521755 POTEDQ86YR6 584 aa19.65■□□□□ 0.74
CDKL3-207ENST00000521755 MAPK8IP2Q13387 824 aaPredicted RBP18.17■□□□□ 0.5
CDKL3-207ENST00000521755 SCAF1Q9H7N4 1312 aaKnown RBP18.16■□□□□ 0.5
CDKL3-207ENST00000521755 DMRT2Q9Y5R5 561 aa18.02■□□□□ 0.48
CDKL3-207ENST00000521755 PPP4R3CPQ6ZMV5 832 aa17.85■□□□□ 0.45
CDKL3-207ENST00000521755 CNKSR2Q8WXI2 1034 aa17.49■□□□□ 0.39
CDKL3-207ENST00000521755 HOXD11P31277 338 aaPredicted RBP17.39■□□□□ 0.37
CDKL3-207ENST00000521755 DCAF8L1A6NGE4 600 aa17.35■□□□□ 0.37
CDKL3-207ENST00000521755 RNF216Q9NWF9 866 aaPredicted RBP17.29■□□□□ 0.36
CDKL3-207ENST00000521755 NCBP3Q53F19 620 aaKnown RBP17.21■□□□□ 0.35
CDKL3-207ENST00000521755 CACNB1Q02641 598 aaPredicted RBP17.05■□□□□ 0.32
CDKL3-207ENST00000521755 NPM3O75607 178 aaKnown RBP16.93■□□□□ 0.3
CDKL3-207ENST00000521755 RNF39Q9H2S5 420 aa16.87■□□□□ 0.29
CDKL3-207ENST00000521755 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
CDKL3-207ENST00000521755 KCNA4P22459 653 aa16.7■□□□□ 0.26
CDKL3-207ENST00000521755 C1QBPQ07021 282 aaKnown RBP16.64■□□□□ 0.25
CDKL3-207ENST00000521755 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.62■□□□□ 0.25
CDKL3-207ENST00000521755 U3KPZ7 1027 aaPredicted RBP16.25■□□□□ 0.19
CDKL3-207ENST00000521755 SLC4A2P04920 1241 aa16.13■□□□□ 0.17
CDKL3-207ENST00000521755 CAPN15O75808 1086 aa16■□□□□ 0.15
CDKL3-207ENST00000521755 SPINK5Q9NQ38 1064 aaPredicted RBP15.99■□□□□ 0.15
CDKL3-207ENST00000521755 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.84■□□□□ 0.13
CDKL3-207ENST00000521755 DSG3P32926 999 aa15.84■□□□□ 0.13
CDKL3-207ENST00000521755 APLP2Q06481 763 aa15.84■□□□□ 0.13
CDKL3-207ENST00000521755 HNRNPUL2Q1KMD3 747 aaKnown RBP15.84■□□□□ 0.13
CDKL3-207ENST00000521755 SLC4A1APQ9BWU0 796 aaKnown RBP15.8■□□□□ 0.12
CDKL3-207ENST00000521755 TRHP20396 242 aaPredicted RBP15.77■□□□□ 0.12
CDKL3-207ENST00000521755 SAMD1Q6SPF0 538 aaPredicted RBP15.75■□□□□ 0.11
CDKL3-207ENST00000521755 ZNF219Q9P2Y4 722 aaPredicted RBP15.72■□□□□ 0.11
CDKL3-207ENST00000521755 MYCNP04198 464 aaPredicted RBP15.67■□□□□ 0.1
CDKL3-207ENST00000521755 ABCB7O75027 752 aa15.62■□□□□ 0.09
CDKL3-207ENST00000521755 FOXD4L1Q9NU39 408 aa15.56■□□□□ 0.08
CDKL3-207ENST00000521755 POTEHQ6S545 545 aa15.36■□□□□ 0.05
CDKL3-207ENST00000521755 POLA2Q14181 598 aa15.34■□□□□ 0.05
CDKL3-207ENST00000521755 ZBTB22O15209 634 aa15.33■□□□□ 0.04
CDKL3-207ENST00000521755 ATF5Q9Y2D1 282 aaPredicted RBP15.29■□□□□ 0.04
CDKL3-207ENST00000521755 RBM42Q9BTD8 480 aaKnown RBP15.14■□□□□ 0.01
CDKL3-207ENST00000521755 ATXN8OSP0DMR3 200 aa15.06■□□□□ 0
CDKL3-207ENST00000521755 ZBTB12Q9Y330 459 aaPredicted RBP15.03■□□□□ -0
CDKL3-207ENST00000521755 OSCARQ8IYS5 282 aa14.84□□□□□ -0.03
CDKL3-207ENST00000521755 AKT1S1Q96B36 256 aa14.8□□□□□ -0.04
CDKL3-207ENST00000521755 CHRDL2Q6WN34 429 aa14.75□□□□□ -0.05
CDKL3-207ENST00000521755 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
CDKL3-207ENST00000521755 FBLN2P98095 1184 aa14.72□□□□□ -0.05
CDKL3-207ENST00000521755 REM2Q8IYK8 340 aaPredicted RBP14.65□□□□□ -0.06
CDKL3-207ENST00000521755 EHMT2Q96KQ7 1210 aa14.63□□□□□ -0.07
CDKL3-207ENST00000521755 MKRN4PQ13434 485 aaPredicted RBP14.58□□□□□ -0.08
CDKL3-207ENST00000521755 SPDYE2BA6NHP3 402 aa14.57□□□□□ -0.08
CDKL3-207ENST00000521755 SPDYE6P0CI01 402 aa14.57□□□□□ -0.08
CDKL3-207ENST00000521755 SPDYE2Q495Y8 402 aa14.57□□□□□ -0.08
CDKL3-207ENST00000521755 PITPNM1O00562 1244 aa14.49□□□□□ -0.09
CDKL3-207ENST00000521755 ZNF692Q9BU19 519 aaPredicted RBP14.44□□□□□ -0.1
CDKL3-207ENST00000521755 PIP4P2Q8N4L2 257 aa14.42□□□□□ -0.1
CDKL3-207ENST00000521755 SSUH2Q9Y2M2 353 aa14.37□□□□□ -0.11
CDKL3-207ENST00000521755 FXR2P51116 673 aaKnown RBP eCLIP14.34□□□□□ -0.11
CDKL3-207ENST00000521755 SPDYE1Q8NFV5 336 aaPredicted RBP14.31□□□□□ -0.12
CDKL3-207ENST00000521755 CLEC11AQ9Y240 323 aa14.31□□□□□ -0.12
CDKL3-207ENST00000521755 SP7Q8TDD2 431 aaPredicted RBP14.23□□□□□ -0.13
CDKL3-207ENST00000521755 PABPN1Q86U42 306 aaKnown RBP eCLIP14.22□□□□□ -0.13
CDKL3-207ENST00000521755 HAX1O00165 279 aa14.17□□□□□ -0.14
CDKL3-207ENST00000521755 PRKAR2AP13861 404 aaKnown RBP14.14□□□□□ -0.15
CDKL3-207ENST00000521755 PRR29P0C7W0 189 aa14.07□□□□□ -0.16
CDKL3-207ENST00000521755 CHADLQ6NUI6 762 aa14.01□□□□□ -0.17
CDKL3-207ENST00000521755 SPDYE4A6NLX3 237 aa13.97□□□□□ -0.17
CDKL3-207ENST00000521755 EVX2Q03828 476 aa13.96□□□□□ -0.17
CDKL3-207ENST00000521755 C19orf67A6NJJ6 358 aa13.88□□□□□ -0.19
CDKL3-207ENST00000521755 STAG3Q9UJ98 1225 aa13.85□□□□□ -0.19
CDKL3-207ENST00000521755 FARP1Q9Y4F1 1045 aaPredicted RBP13.79□□□□□ -0.2
CDKL3-207ENST00000521755 CREBZFQ9NS37 354 aa13.71□□□□□ -0.21
CDKL3-207ENST00000521755 CD44P16070 742 aaKnown RBP13.7□□□□□ -0.22
CDKL3-207ENST00000521755 GABBR2O75899 941 aa13.66□□□□□ -0.22
CDKL3-207ENST00000521755 PROM2Q8N271 834 aa13.59□□□□□ -0.23
CDKL3-207ENST00000521755 ZRANB1Q9UGI0 708 aa13.53□□□□□ -0.24
CDKL3-207ENST00000521755 NPM1P06748 294 aaKnown RBP eCLIP13.5□□□□□ -0.25
CDKL3-207ENST00000521755 CLCN6P51797 869 aa13.48□□□□□ -0.25
CDKL3-207ENST00000521755 PAK3O75914 559 aaPredicted RBP13.46□□□□□ -0.25
CDKL3-207ENST00000521755 MNX1P50219 401 aaPredicted RBP13.46□□□□□ -0.25
CDKL3-207ENST00000521755 ZNF579Q8NAF0 562 aaKnown RBP13.46□□□□□ -0.25
CDKL3-207ENST00000521755 FKBP8Q14318 412 aa13.39□□□□□ -0.27
CDKL3-207ENST00000521755 LHX8Q68G74 356 aa13.36□□□□□ -0.27
CDKL3-207ENST00000521755 POTEIP0CG38 1075 aa13.35□□□□□ -0.27
CDKL3-207ENST00000521755 DCBLD2Q96PD2 775 aa13.35□□□□□ -0.27
CDKL3-207ENST00000521755 PLEKHG5O94827 1062 aa13.34□□□□□ -0.27
CDKL3-207ENST00000521755 MIER1Q8N108 512 aa13.34□□□□□ -0.27
CDKL3-207ENST00000521755 PHF12Q96QT6 1004 aa13.33□□□□□ -0.28
CDKL3-207ENST00000521755 GALR2O43603 387 aaPredicted RBP13.31□□□□□ -0.28
CDKL3-207ENST00000521755 TSPYL2Q9H2G4 693 aaPredicted RBP13.26□□□□□ -0.29
CDKL3-207ENST00000521755 PLCD3Q8N3E9 789 aa13.25□□□□□ -0.29
CDKL3-207ENST00000521755 MS4A3Q96HJ5 214 aa13.16□□□□□ -0.3
CDKL3-207ENST00000521755 CCDC61Q9Y6R9 512 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms