RNA–Protein interactions for RNA: ENST00000314218.7

BBS12-201, Transcript of Bardet-Biedl syndrome 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BBS12, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS12-201ENST00000314218 NISCHQ9Y2I1 1504 aa18.38■□□□□ 0.53
BBS12-201ENST00000314218 SHROOM4Q9ULL8 1493 aa15.7■□□□□ 0.1
BBS12-201ENST00000314218 CCDC180Q9P1Z9 1646 aa15.6■□□□□ 0.09
BBS12-201ENST00000314218 ZCCHC6Q5VYS8 1495 aaKnown RBP15.58■□□□□ 0.08
BBS12-201ENST00000314218 SUPT5HO00267 1087 aaKnown RBP15.38■□□□□ 0.05
BBS12-201ENST00000314218 DCAF8L2P0C7V8 631 aa15.11■□□□□ 0.01
BBS12-201ENST00000314218 MYO15BQ96JP2 1530 aa15.09■□□□□ 0.01
BBS12-201ENST00000314218 DCAF1Q9Y4B6 1507 aa15.06■□□□□ 0
BBS12-201ENST00000314218 CHIC1Q5VXU3 224 aa15.03■□□□□ -0
BBS12-201ENST00000314218 ABCC9O60706 1549 aa14.72□□□□□ -0.05
BBS12-201ENST00000314218 SCRIBQ14160 1630 aa14.65□□□□□ -0.06
BBS12-201ENST00000314218 HRCP23327 699 aa14.64□□□□□ -0.07
BBS12-201ENST00000314218 LOC105371045A0A1W2PR82 267 aa14.6□□□□□ -0.07
BBS12-201ENST00000314218 PCGF6Q9BYE7 350 aa14.59□□□□□ -0.07
BBS12-201ENST00000314218 RSF1Q96T23 1441 aaPredicted RBP14.57□□□□□ -0.08
BBS12-201ENST00000314218 RB1CC1Q8TDY2 1594 aa14.47□□□□□ -0.09
BBS12-201ENST00000314218 PPARGC1BQ86YN6 1023 aaKnown RBP14.4□□□□□ -0.1
BBS12-201ENST00000314218 CECR2Q9BXF3 1484 aa14.37□□□□□ -0.11
BBS12-201ENST00000314218 NACADO15069 1562 aa14.37□□□□□ -0.11
BBS12-201ENST00000314218 MROH2BQ7Z745 1585 aa14.33□□□□□ -0.12
BBS12-201ENST00000314218 TRIM41Q8WV44 630 aa14.29□□□□□ -0.12
BBS12-201ENST00000314218 WIZO95785 1651 aa14.27□□□□□ -0.12
BBS12-201ENST00000314218 TRIM26Q12899 539 aaPredicted RBP14.27□□□□□ -0.12
BBS12-201ENST00000314218 FAM9AQ8IZU1 332 aaPredicted RBP14.2□□□□□ -0.14
BBS12-201ENST00000314218 EIF4G1Q04637 1599 aaKnown RBP14.15□□□□□ -0.14
BBS12-201ENST00000314218 BAZ1AQ9NRL2 1556 aaPredicted RBP14.15□□□□□ -0.14
BBS12-201ENST00000314218 EHMT2Q96KQ7 1210 aa14.1□□□□□ -0.15
BBS12-201ENST00000314218 UNC13AQ9UPW8 1703 aa14.06□□□□□ -0.16
BBS12-201ENST00000314218 SMARCA4P51532 1647 aa14□□□□□ -0.17
BBS12-201ENST00000314218 TOP2AP11388 1531 aaKnown RBP14□□□□□ -0.17
BBS12-201ENST00000314218 ABCC8Q09428 1581 aa13.97□□□□□ -0.17
BBS12-201ENST00000314218 SMARCA2P51531 1590 aa13.96□□□□□ -0.18
BBS12-201ENST00000314218 CCDC88BA6NC98 1476 aa13.95□□□□□ -0.18
BBS12-201ENST00000314218 ZEB1P37275 1124 aaPredicted RBP13.91□□□□□ -0.18
BBS12-201ENST00000314218 BICRAQ9NZM4 1560 aa13.84□□□□□ -0.19
BBS12-201ENST00000314218 SOGA1O94964 1423 aa13.83□□□□□ -0.2
BBS12-201ENST00000314218 RUSC2Q8N2Y8 1516 aa13.79□□□□□ -0.2
BBS12-201ENST00000314218 WRNQ14191 1432 aaPredicted RBP eCLIP13.76□□□□□ -0.21
BBS12-201ENST00000314218 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
BBS12-201ENST00000314218 CEP162Q5TB80 1403 aa13.75□□□□□ -0.21
BBS12-201ENST00000314218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.73□□□□□ -0.21
BBS12-201ENST00000314218 PEG3Q9GZU2 1588 aa13.73□□□□□ -0.21
BBS12-201ENST00000314218 TNIKQ9UKE5 1360 aa13.71□□□□□ -0.22
BBS12-201ENST00000314218 CSRNP3Q8WYN3 585 aa13.67□□□□□ -0.22
BBS12-201ENST00000314218 EEA1Q15075 1411 aa13.66□□□□□ -0.22
BBS12-201ENST00000314218 SYNJ1O43426 1573 aa13.66□□□□□ -0.22
BBS12-201ENST00000314218 TTBK1Q5TCY1 1321 aaPredicted RBP13.66□□□□□ -0.22
BBS12-201ENST00000314218 CCER1Q8TC90 406 aaPredicted RBP13.62□□□□□ -0.23
BBS12-201ENST00000314218 GOLGA3Q08378 1498 aa13.61□□□□□ -0.23
BBS12-201ENST00000314218 ATAD2BQ9ULI0 1458 aa13.6□□□□□ -0.23
BBS12-201ENST00000314218 UBTFP17480 764 aaKnown RBP13.58□□□□□ -0.24
BBS12-201ENST00000314218 SCAF1Q9H7N4 1312 aaKnown RBP13.58□□□□□ -0.24
BBS12-201ENST00000314218 KIF21BO75037 1637 aa13.56□□□□□ -0.24
BBS12-201ENST00000314218 BAZ1BQ9UIG0 1483 aaKnown RBP13.54□□□□□ -0.24
BBS12-201ENST00000314218 CEP164Q9UPV0 1460 aa13.52□□□□□ -0.25
BBS12-201ENST00000314218 RAPGEF2Q9Y4G8 1499 aa13.48□□□□□ -0.25
BBS12-201ENST00000314218 CLIP1P30622 1438 aa13.46□□□□□ -0.26
BBS12-201ENST00000314218 TOP2BQ02880 1626 aa13.45□□□□□ -0.26
BBS12-201ENST00000314218 BIVM-ERCC5R4GMW8 1640 aa13.42□□□□□ -0.26
BBS12-201ENST00000314218 VPS8Q8N3P4 1428 aa13.42□□□□□ -0.26
BBS12-201ENST00000314218 DIEXFQ68CQ4 756 aaKnown RBP13.42□□□□□ -0.26
BBS12-201ENST00000314218 NEUROD1Q13562 356 aa13.39□□□□□ -0.27
BBS12-201ENST00000314218 ACIN1Q9UKV3 1341 aaKnown RBP13.37□□□□□ -0.27
BBS12-201ENST00000314218 HNRNPUL2Q1KMD3 747 aaKnown RBP13.35□□□□□ -0.27
BBS12-201ENST00000314218 PRXQ9BXM0 1461 aa13.33□□□□□ -0.28
BBS12-201ENST00000314218 RANGAP1P46060 587 aaPredicted RBP13.33□□□□□ -0.28
BBS12-201ENST00000314218 CUX1P39880 1505 aa13.33□□□□□ -0.28
BBS12-201ENST00000314218 HMGXB3Q12766 1538 aa13.32□□□□□ -0.28
BBS12-201ENST00000314218 ERICH3Q5RHP9 1530 aa13.31□□□□□ -0.28
BBS12-201ENST00000314218 ZNF316A6NFI3 1004 aaPredicted RBP13.31□□□□□ -0.28
BBS12-201ENST00000314218 NCAPD3P42695 1498 aa13.31□□□□□ -0.28
BBS12-201ENST00000314218 ARAP1Q96P48 1450 aa13.31□□□□□ -0.28
BBS12-201ENST00000314218 CFTRP13569 1480 aa13.24□□□□□ -0.29
BBS12-201ENST00000314218 KANK4Q5T7N3 995 aaPredicted RBP13.22□□□□□ -0.29
BBS12-201ENST00000314218 APLP2Q06481 763 aa13.22□□□□□ -0.29
BBS12-201ENST00000314218 GTF3C3Q9Y5Q9 886 aa13.22□□□□□ -0.29
BBS12-201ENST00000314218 PRDM2Q13029 1718 aa13.18□□□□□ -0.3
BBS12-201ENST00000314218 KIF27Q86VH2 1401 aa13.18□□□□□ -0.3
BBS12-201ENST00000314218 CENPBP07199 599 aaPredicted RBP13.18□□□□□ -0.3
BBS12-201ENST00000314218 MIER1Q8N108 512 aa13.17□□□□□ -0.3
BBS12-201ENST00000314218 DHX57Q6P158 1386 aaKnown RBP13.17□□□□□ -0.3
BBS12-201ENST00000314218 ARHGAP35Q9NRY4 1499 aa13.17□□□□□ -0.3
BBS12-201ENST00000314218 PELP1Q8IZL8 1130 aaKnown RBP13.16□□□□□ -0.3
BBS12-201ENST00000314218 RRBP1Q9P2E9 1410 aaKnown RBP13.14□□□□□ -0.31
BBS12-201ENST00000314218 YTHDC1Q96MU7 727 aaKnown RBP13.11□□□□□ -0.31
BBS12-201ENST00000314218 IGF1RP08069 1367 aa13.09□□□□□ -0.31
BBS12-201ENST00000314218 CUX2O14529 1486 aa13.09□□□□□ -0.31
BBS12-201ENST00000314218 CLSPNQ9HAW4 1339 aa13.06□□□□□ -0.32
BBS12-201ENST00000314218 FGD5Q6ZNL6 1462 aa13.05□□□□□ -0.32
BBS12-201ENST00000314218 CADPSQ9ULU8 1353 aa13.04□□□□□ -0.32
BBS12-201ENST00000314218 CCNB3Q8WWL7 1395 aa13.04□□□□□ -0.32
BBS12-201ENST00000314218 TIAM1Q13009 1591 aa13.03□□□□□ -0.32
BBS12-201ENST00000314218 CARMIL1Q5VZK9 1371 aa13□□□□□ -0.33
BBS12-201ENST00000314218 MAP3K1Q13233 1512 aa12.98□□□□□ -0.33
BBS12-201ENST00000314218 MAPKBP1O60336 1514 aa12.98□□□□□ -0.33
BBS12-201ENST00000314218 CC2D2AQ9P2K1 1620 aa12.98□□□□□ -0.33
BBS12-201ENST00000314218 ITGAEP38570 1179 aa12.96□□□□□ -0.33
BBS12-201ENST00000314218 LRRC9Q6ZRR7 1453 aa12.96□□□□□ -0.33
BBS12-201ENST00000314218 RAB3GAP2Q9H2M9 1393 aa12.96□□□□□ -0.34
BBS12-201ENST00000314218 PHLDB1Q86UU1 1377 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms