Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 AL359258.2-201ENST00000564063 1566 ntBASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 AL354751.1-201ENST00000412768 1863 ntBASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC01558Q9Y6Z2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 CA15P2-201ENST00000611168 834 ntBASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LINC01558Q9Y6Z2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LINC01558Q9Y6Z2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01558Q9Y6Z2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms