Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.91■■□□□ 1.26
PTCH2Q9Y6C5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.91■■□□□ 1.26
PTCH2Q9Y6C5 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PTCH2Q9Y6C5 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
PTCH2Q9Y6C5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PTCH2Q9Y6C5 C1orf229-201ENST00000623686 2258 ntBASIC22.91■■□□□ 1.26
PTCH2Q9Y6C5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
PTCH2Q9Y6C5 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PTCH2Q9Y6C5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC22.9■■□□□ 1.26
PTCH2Q9Y6C5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PTCH2Q9Y6C5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PTCH2Q9Y6C5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.9■■□□□ 1.26
PTCH2Q9Y6C5 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
PTCH2Q9Y6C5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
PTCH2Q9Y6C5 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PTCH2Q9Y6C5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PTCH2Q9Y6C5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.89■■□□□ 1.25
PTCH2Q9Y6C5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.89■■□□□ 1.25
PTCH2Q9Y6C5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PTCH2Q9Y6C5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.89■■□□□ 1.25
PTCH2Q9Y6C5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.89■■□□□ 1.25
PTCH2Q9Y6C5 AC063952.2-201ENST00000498792 1227 ntBASIC22.89■■□□□ 1.25
PTCH2Q9Y6C5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC22.89■■□□□ 1.25
PTCH2Q9Y6C5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC22.89■■□□□ 1.25
PTCH2Q9Y6C5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC22.89■■□□□ 1.25
PTCH2Q9Y6C5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
PTCH2Q9Y6C5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.89■■□□□ 1.25
PTCH2Q9Y6C5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PTCH2Q9Y6C5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PTCH2Q9Y6C5 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PTCH2Q9Y6C5 FAM99A-202ENST00000538190 1989 ntBASIC22.89■■□□□ 1.25
PTCH2Q9Y6C5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.88■■□□□ 1.25
PTCH2Q9Y6C5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PTCH2Q9Y6C5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PTCH2Q9Y6C5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PTCH2Q9Y6C5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
PTCH2Q9Y6C5 COPE-203ENST00000351079 907 ntTSL 2 BASIC22.88■■□□□ 1.25
PTCH2Q9Y6C5 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
PTCH2Q9Y6C5 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC22.88■■□□□ 1.25
PTCH2Q9Y6C5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC22.88■■□□□ 1.25
PTCH2Q9Y6C5 AC023632.3-201ENST00000521633 145 ntBASIC22.88■■□□□ 1.25
PTCH2Q9Y6C5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
PTCH2Q9Y6C5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.88■■□□□ 1.25
PTCH2Q9Y6C5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PTCH2Q9Y6C5 AC127496.7-201ENST00000625110 1798 ntBASIC22.88■■□□□ 1.25
PTCH2Q9Y6C5 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
PTCH2Q9Y6C5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.87■■□□□ 1.25
PTCH2Q9Y6C5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PTCH2Q9Y6C5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PTCH2Q9Y6C5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PTCH2Q9Y6C5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PTCH2Q9Y6C5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
PTCH2Q9Y6C5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PTCH2Q9Y6C5 KRT18P48-201ENST00000434763 852 ntBASIC22.87■■□□□ 1.25
PTCH2Q9Y6C5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PTCH2Q9Y6C5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PTCH2Q9Y6C5 C2orf69P3-201ENST00000565542 1120 ntBASIC22.87■■□□□ 1.25
PTCH2Q9Y6C5 LINC01238-205ENST00000567549 1107 ntBASIC22.87■■□□□ 1.25
PTCH2Q9Y6C5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PTCH2Q9Y6C5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PTCH2Q9Y6C5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 AC080038.3-201ENST00000623346 1952 ntBASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
PTCH2Q9Y6C5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.85■■□□□ 1.25
PTCH2Q9Y6C5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC22.85■■□□□ 1.25
PTCH2Q9Y6C5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PTCH2Q9Y6C5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PTCH2Q9Y6C5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PTCH2Q9Y6C5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PTCH2Q9Y6C5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PTCH2Q9Y6C5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
PTCH2Q9Y6C5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PTCH2Q9Y6C5 BX664615.1-201ENST00000443558 458 ntBASIC22.85■■□□□ 1.25
PTCH2Q9Y6C5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PTCH2Q9Y6C5 MYC-208ENST00000641036 567 ntBASIC22.85■■□□□ 1.25
PTCH2Q9Y6C5 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.85■■□□□ 1.25
PTCH2Q9Y6C5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.85■■□□□ 1.25
PTCH2Q9Y6C5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.85■■□□□ 1.25
PTCH2Q9Y6C5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PTCH2Q9Y6C5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PTCH2Q9Y6C5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms