Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
AP4S1Q9Y587 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
AP4S1Q9Y587 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4S1Q9Y587 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4S1Q9Y587 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4S1Q9Y587 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
AP4S1Q9Y587 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4S1Q9Y587 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
AP4S1Q9Y587 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.03■□□□□ 0.64
AP4S1Q9Y587 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
AP4S1Q9Y587 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
AP4S1Q9Y587 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
AP4S1Q9Y587 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
AP4S1Q9Y587 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4S1Q9Y587 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
AP4S1Q9Y587 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 MIR2861-201ENST00000636310 90 ntBASIC19.02■□□□□ 0.64
AP4S1Q9Y587 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.02■□□□□ 0.64
AP4S1Q9Y587 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
AP4S1Q9Y587 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
AP4S1Q9Y587 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
AP4S1Q9Y587 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
AP4S1Q9Y587 AC061975.6-201ENST00000579045 1553 ntBASIC19.02■□□□□ 0.63
AP4S1Q9Y587 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
AP4S1Q9Y587 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
AP4S1Q9Y587 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
AP4S1Q9Y587 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.01■□□□□ 0.63
AP4S1Q9Y587 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.01■□□□□ 0.63
AP4S1Q9Y587 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.01■□□□□ 0.63
AP4S1Q9Y587 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.01■□□□□ 0.63
AP4S1Q9Y587 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.01■□□□□ 0.63
AP4S1Q9Y587 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP4S1Q9Y587 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP4S1Q9Y587 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP4S1Q9Y587 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.01■□□□□ 0.63
AP4S1Q9Y587 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.01■□□□□ 0.63
AP4S1Q9Y587 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.01■□□□□ 0.63
AP4S1Q9Y587 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP4S1Q9Y587 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP4S1Q9Y587 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
AP4S1Q9Y587 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
AP4S1Q9Y587 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19■□□□□ 0.63
AP4S1Q9Y587 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
AP4S1Q9Y587 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP4S1Q9Y587 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
AP4S1Q9Y587 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
AP4S1Q9Y587 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP4S1Q9Y587 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP4S1Q9Y587 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP4S1Q9Y587 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
AP4S1Q9Y587 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP4S1Q9Y587 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
AP4S1Q9Y587 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19■□□□□ 0.63
AP4S1Q9Y587 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19■□□□□ 0.63
AP4S1Q9Y587 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
AP4S1Q9Y587 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP4S1Q9Y587 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
AP4S1Q9Y587 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP4S1Q9Y587 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP4S1Q9Y587 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19■□□□□ 0.63
AP4S1Q9Y587 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19■□□□□ 0.63
AP4S1Q9Y587 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19■□□□□ 0.63
AP4S1Q9Y587 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19■□□□□ 0.63
AP4S1Q9Y587 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19■□□□□ 0.63
AP4S1Q9Y587 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
AP4S1Q9Y587 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19■□□□□ 0.63
AP4S1Q9Y587 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19■□□□□ 0.63
AP4S1Q9Y587 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4S1Q9Y587 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4S1Q9Y587 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4S1Q9Y587 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.99■□□□□ 0.63
AP4S1Q9Y587 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4S1Q9Y587 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4S1Q9Y587 AC005224.4-201ENST00000583262 1652 ntBASIC18.99■□□□□ 0.63
AP4S1Q9Y587 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
AP4S1Q9Y587 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
AP4S1Q9Y587 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms