Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MRPS28Q9Y2Q9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
MRPS28Q9Y2Q9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 AC125437.2-201ENST00000625180 2167 ntBASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MRPS28Q9Y2Q9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 RBM17P2-201ENST00000616397 1405 ntBASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 AC116562.4-201ENST00000641316 2276 ntBASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 AL158211.5-201ENST00000623583 2518 ntBASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 AC138932.1-201ENST00000534164 6830 ntBASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.31■□□□□ 0.36
MRPS28Q9Y2Q9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
MRPS28Q9Y2Q9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRPS28Q9Y2Q9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.3■□□□□ 0.36
MRPS28Q9Y2Q9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
MRPS28Q9Y2Q9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.3■□□□□ 0.36
MRPS28Q9Y2Q9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
MRPS28Q9Y2Q9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRPS28Q9Y2Q9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.3■□□□□ 0.36
MRPS28Q9Y2Q9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRPS28Q9Y2Q9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.3■□□□□ 0.36
MRPS28Q9Y2Q9 TERF1P2-201ENST00000583350 1212 ntBASIC17.3■□□□□ 0.36
MRPS28Q9Y2Q9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
MRPS28Q9Y2Q9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MRPS28Q9Y2Q9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
MRPS28Q9Y2Q9 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.3■□□□□ 0.36
MRPS28Q9Y2Q9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.3■□□□□ 0.36
MRPS28Q9Y2Q9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRPS28Q9Y2Q9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRPS28Q9Y2Q9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 AC005837.3-201ENST00000612163 286 ntBASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRPS28Q9Y2Q9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms