Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CISHQ9NSE2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CISHQ9NSE2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CISHQ9NSE2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.53■■□□□ 1.04
CISHQ9NSE2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CISHQ9NSE2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.53■■□□□ 1.04
CISHQ9NSE2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CISHQ9NSE2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CISHQ9NSE2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CISHQ9NSE2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CISHQ9NSE2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.53■■□□□ 1.04
CISHQ9NSE2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CISHQ9NSE2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CISHQ9NSE2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CISHQ9NSE2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CISHQ9NSE2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CISHQ9NSE2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CISHQ9NSE2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
CISHQ9NSE2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CISHQ9NSE2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CISHQ9NSE2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.52■■□□□ 1.04
CISHQ9NSE2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.52■■□□□ 1.04
CISHQ9NSE2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CISHQ9NSE2 AC083880.1-201ENST00000608266 535 ntBASIC21.52■■□□□ 1.04
CISHQ9NSE2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.52■■□□□ 1.04
CISHQ9NSE2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CISHQ9NSE2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CISHQ9NSE2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CISHQ9NSE2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CISHQ9NSE2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CISHQ9NSE2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CISHQ9NSE2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.52■■□□□ 1.04
CISHQ9NSE2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.52■■□□□ 1.04
CISHQ9NSE2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CISHQ9NSE2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CISHQ9NSE2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CISHQ9NSE2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.51■■□□□ 1.03
CISHQ9NSE2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CISHQ9NSE2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
CISHQ9NSE2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CISHQ9NSE2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CISHQ9NSE2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.51■■□□□ 1.03
CISHQ9NSE2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CISHQ9NSE2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.51■■□□□ 1.03
CISHQ9NSE2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CISHQ9NSE2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.51■■□□□ 1.03
CISHQ9NSE2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CISHQ9NSE2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.51■■□□□ 1.03
CISHQ9NSE2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CISHQ9NSE2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CISHQ9NSE2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CISHQ9NSE2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CISHQ9NSE2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
CISHQ9NSE2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CISHQ9NSE2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CISHQ9NSE2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CISHQ9NSE2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CISHQ9NSE2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CISHQ9NSE2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CISHQ9NSE2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CISHQ9NSE2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CISHQ9NSE2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CISHQ9NSE2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CISHQ9NSE2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CISHQ9NSE2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.5■■□□□ 1.03
CISHQ9NSE2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
CISHQ9NSE2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.5■■□□□ 1.03
CISHQ9NSE2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.5■■□□□ 1.03
CISHQ9NSE2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CISHQ9NSE2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CISHQ9NSE2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CISHQ9NSE2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
CISHQ9NSE2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CISHQ9NSE2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CISHQ9NSE2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CISHQ9NSE2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CISHQ9NSE2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CISHQ9NSE2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.49■■□□□ 1.03
CISHQ9NSE2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CISHQ9NSE2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CISHQ9NSE2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.49■■□□□ 1.03
CISHQ9NSE2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.49■■□□□ 1.03
CISHQ9NSE2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.49■■□□□ 1.03
CISHQ9NSE2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.49■■□□□ 1.03
CISHQ9NSE2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CISHQ9NSE2 AL391422.3-201ENST00000603791 2761 ntBASIC21.49■■□□□ 1.03
CISHQ9NSE2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CISHQ9NSE2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CISHQ9NSE2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.49■■□□□ 1.03
CISHQ9NSE2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CISHQ9NSE2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CISHQ9NSE2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.49■■□□□ 1.03
CISHQ9NSE2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.48■■□□□ 1.03
CISHQ9NSE2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CISHQ9NSE2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CISHQ9NSE2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.48■■□□□ 1.03
CISHQ9NSE2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CISHQ9NSE2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CISHQ9NSE2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CISHQ9NSE2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms