Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LIN28AQ9H9Z2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 RBM17P2-201ENST00000616397 1405 ntBASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 AC018445.3-201ENST00000624177 1945 ntBASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 AC005181.1-201ENST00000604782 1256 ntBASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LIN28AQ9H9Z2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
LIN28AQ9H9Z2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.33■□□□□ 0.69
LIN28AQ9H9Z2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
LIN28AQ9H9Z2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LIN28AQ9H9Z2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LIN28AQ9H9Z2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LIN28AQ9H9Z2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
LIN28AQ9H9Z2 HLA-L-209ENST00000420110 1011 ntBASIC19.33■□□□□ 0.68
LIN28AQ9H9Z2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LIN28AQ9H9Z2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
LIN28AQ9H9Z2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.33■□□□□ 0.68
LIN28AQ9H9Z2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.33■□□□□ 0.68
LIN28AQ9H9Z2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
LIN28AQ9H9Z2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.33■□□□□ 0.68
LIN28AQ9H9Z2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LIN28AQ9H9Z2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LIN28AQ9H9Z2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LIN28AQ9H9Z2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.33■□□□□ 0.68
LIN28AQ9H9Z2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LIN28AQ9H9Z2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
LIN28AQ9H9Z2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LIN28AQ9H9Z2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LIN28AQ9H9Z2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LIN28AQ9H9Z2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.32■□□□□ 0.68
LIN28AQ9H9Z2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LIN28AQ9H9Z2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LIN28AQ9H9Z2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.32■□□□□ 0.68
LIN28AQ9H9Z2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LIN28AQ9H9Z2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.32■□□□□ 0.68
LIN28AQ9H9Z2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.32■□□□□ 0.68
LIN28AQ9H9Z2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LIN28AQ9H9Z2 AC068338.2-201ENST00000563278 1430 ntBASIC19.32■□□□□ 0.68
LIN28AQ9H9Z2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LIN28AQ9H9Z2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LIN28AQ9H9Z2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LIN28AQ9H9Z2 SMG8-203ENST00000578922 2178 ntBASIC19.32■□□□□ 0.68
LIN28AQ9H9Z2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LIN28AQ9H9Z2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 AC112907.3-201ENST00000577781 2400 ntBASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 ID1-201ENST00000376105 1233 ntBASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 AC013268.1-206ENST00000638368 961 ntBASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 AC112229.1-201ENST00000639295 961 ntBASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.31■□□□□ 0.68
LIN28AQ9H9Z2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LIN28AQ9H9Z2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LIN28AQ9H9Z2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
LIN28AQ9H9Z2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LIN28AQ9H9Z2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LIN28AQ9H9Z2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LIN28AQ9H9Z2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.3■□□□□ 0.68
LIN28AQ9H9Z2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.3■□□□□ 0.68
LIN28AQ9H9Z2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LIN28AQ9H9Z2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.3■□□□□ 0.68
LIN28AQ9H9Z2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.3■□□□□ 0.68
LIN28AQ9H9Z2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms