Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDCP1Q9H5V8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDCP1Q9H5V8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 PRORSD1P-201ENST00000295112 541 ntBASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 AC008687.6-201ENST00000596318 630 ntBASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
CDCP1Q9H5V8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 AC128676.1-201ENST00000454392 318 ntBASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 UNC93B4-201ENST00000505679 747 ntBASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 AC008403.3-201ENST00000598924 454 ntBASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 MIR2861-201ENST00000636310 90 ntBASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDCP1Q9H5V8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDCP1Q9H5V8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDCP1Q9H5V8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDCP1Q9H5V8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CDCP1Q9H5V8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDCP1Q9H5V8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDCP1Q9H5V8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDCP1Q9H5V8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CDCP1Q9H5V8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CDCP1Q9H5V8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
CDCP1Q9H5V8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDCP1Q9H5V8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDCP1Q9H5V8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.75■□□□□ 0.59
CDCP1Q9H5V8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.75■□□□□ 0.59
CDCP1Q9H5V8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.75■□□□□ 0.59
CDCP1Q9H5V8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDCP1Q9H5V8 SOX15-203ENST00000570788 1093 ntBASIC18.75■□□□□ 0.59
CDCP1Q9H5V8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDCP1Q9H5V8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDCP1Q9H5V8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CDCP1Q9H5V8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.74■□□□□ 0.59
CDCP1Q9H5V8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDCP1Q9H5V8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms