Protein–RNA interactions for Protein: Q9H2D6

TRIOBP, TRIO and F-actin-binding protein, humanhuman

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBPQ9H2D6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
TRIOBPQ9H2D6 LINC02084-201ENST00000606069 1096 ntBASIC21.77■■□□□ 1.08
TRIOBPQ9H2D6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.77■■□□□ 1.08
TRIOBPQ9H2D6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
TRIOBPQ9H2D6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIOBPQ9H2D6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIOBPQ9H2D6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIOBPQ9H2D6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
TRIOBPQ9H2D6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIOBPQ9H2D6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.76■■□□□ 1.07
TRIOBPQ9H2D6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.76■■□□□ 1.07
TRIOBPQ9H2D6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIOBPQ9H2D6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.76■■□□□ 1.07
TRIOBPQ9H2D6 AL356652.1-201ENST00000615962 565 ntBASIC21.76■■□□□ 1.07
TRIOBPQ9H2D6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIOBPQ9H2D6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIOBPQ9H2D6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.76■■□□□ 1.07
TRIOBPQ9H2D6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIOBPQ9H2D6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TRIOBPQ9H2D6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIOBPQ9H2D6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIOBPQ9H2D6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIOBPQ9H2D6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIOBPQ9H2D6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRIOBPQ9H2D6 AC004870.1-201ENST00000315132 882 ntBASIC21.75■■□□□ 1.07
TRIOBPQ9H2D6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.75■■□□□ 1.07
TRIOBPQ9H2D6 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.75■■□□□ 1.07
TRIOBPQ9H2D6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIOBPQ9H2D6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRIOBPQ9H2D6 AC116050.2-201ENST00000612102 1779 ntBASIC21.75■■□□□ 1.07
TRIOBPQ9H2D6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIOBPQ9H2D6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TRIOBPQ9H2D6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.75■■□□□ 1.07
TRIOBPQ9H2D6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRIOBPQ9H2D6 AC083849.1-201ENST00000615227 514 ntBASIC21.75■■□□□ 1.07
TRIOBPQ9H2D6 AL445675.2-201ENST00000620291 557 ntBASIC21.75■■□□□ 1.07
TRIOBPQ9H2D6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.75■■□□□ 1.07
TRIOBPQ9H2D6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.75■■□□□ 1.07
TRIOBPQ9H2D6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIOBPQ9H2D6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC21.74■■□□□ 1.07
TRIOBPQ9H2D6 VENTXP5-201ENST00000523979 775 ntBASIC21.74■■□□□ 1.07
TRIOBPQ9H2D6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.74■■□□□ 1.07
TRIOBPQ9H2D6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.74■■□□□ 1.07
TRIOBPQ9H2D6 IFNL4P1-201ENST00000607083 540 ntBASIC21.74■■□□□ 1.07
TRIOBPQ9H2D6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.74■■□□□ 1.07
TRIOBPQ9H2D6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.74■■□□□ 1.07
TRIOBPQ9H2D6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.74■■□□□ 1.07
TRIOBPQ9H2D6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIOBPQ9H2D6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
TRIOBPQ9H2D6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.74■■□□□ 1.07
TRIOBPQ9H2D6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
TRIOBPQ9H2D6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIOBPQ9H2D6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.73■■□□□ 1.07
TRIOBPQ9H2D6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIOBPQ9H2D6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIOBPQ9H2D6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIOBPQ9H2D6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TRIOBPQ9H2D6 ATP5G2P1-201ENST00000433580 426 ntBASIC21.73■■□□□ 1.07
TRIOBPQ9H2D6 HOMER2P1-201ENST00000455653 964 ntBASIC21.73■■□□□ 1.07
TRIOBPQ9H2D6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.73■■□□□ 1.07
TRIOBPQ9H2D6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
TRIOBPQ9H2D6 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.73■■□□□ 1.07
TRIOBPQ9H2D6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIOBPQ9H2D6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIOBPQ9H2D6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TRIOBPQ9H2D6 AC022898.2-201ENST00000616822 1312 ntBASIC21.73■■□□□ 1.07
TRIOBPQ9H2D6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIOBPQ9H2D6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.73■■□□□ 1.07
TRIOBPQ9H2D6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC21.73■■□□□ 1.07
TRIOBPQ9H2D6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.73■■□□□ 1.07
TRIOBPQ9H2D6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.73■■□□□ 1.07
TRIOBPQ9H2D6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIOBPQ9H2D6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TRIOBPQ9H2D6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.72■■□□□ 1.07
TRIOBPQ9H2D6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIOBPQ9H2D6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIOBPQ9H2D6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIOBPQ9H2D6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.72■■□□□ 1.07
TRIOBPQ9H2D6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIOBPQ9H2D6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIOBPQ9H2D6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
TRIOBPQ9H2D6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
TRIOBPQ9H2D6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIOBPQ9H2D6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIOBPQ9H2D6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIOBPQ9H2D6 AC007663.1-201ENST00000438948 1240 ntBASIC21.72■■□□□ 1.07
TRIOBPQ9H2D6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIOBPQ9H2D6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIOBPQ9H2D6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIOBPQ9H2D6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIOBPQ9H2D6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIOBPQ9H2D6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIOBPQ9H2D6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIOBPQ9H2D6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.71■■□□□ 1.07
TRIOBPQ9H2D6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIOBPQ9H2D6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIOBPQ9H2D6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.71■■□□□ 1.07
TRIOBPQ9H2D6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.71■■□□□ 1.07
TRIOBPQ9H2D6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIOBPQ9H2D6 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms