Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 PVT1_1.1-201ENST00000615125 194 ntBASIC16.3■□□□□ 0.2
NKX6-2Q9C056 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 AC068587.7-201ENST00000641602 218 ntBASIC16.3■□□□□ 0.2
NKX6-2Q9C056 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.3■□□□□ 0.2
NKX6-2Q9C056 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX6-2Q9C056 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-2Q9C056 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-2Q9C056 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NKX6-2Q9C056 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.28■□□□□ 0.2
NKX6-2Q9C056 AC139713.2-201ENST00000641328 2723 ntBASIC16.28■□□□□ 0.2
NKX6-2Q9C056 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-2Q9C056 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.28■□□□□ 0.2
NKX6-2Q9C056 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-2Q9C056 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NKX6-2Q9C056 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-2Q9C056 AC093484.2-201ENST00000580996 2166 ntBASIC16.28■□□□□ 0.2
NKX6-2Q9C056 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
NKX6-2Q9C056 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.28■□□□□ 0.2
NKX6-2Q9C056 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NKX6-2Q9C056 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX6-2Q9C056 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.28■□□□□ 0.2
NKX6-2Q9C056 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.28■□□□□ 0.2
NKX6-2Q9C056 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.28■□□□□ 0.2
NKX6-2Q9C056 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
NKX6-2Q9C056 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-2Q9C056 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-2Q9C056 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.27■□□□□ 0.2
NKX6-2Q9C056 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-2Q9C056 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-2Q9C056 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-2Q9C056 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-2Q9C056 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-2Q9C056 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.27■□□□□ 0.2
NKX6-2Q9C056 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-2Q9C056 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.27■□□□□ 0.2
NKX6-2Q9C056 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-2Q9C056 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-2Q9C056 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.27■□□□□ 0.2
NKX6-2Q9C056 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-2Q9C056 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.27■□□□□ 0.2
NKX6-2Q9C056 AL034346.1-201ENST00000568244 1277 ntBASIC16.27■□□□□ 0.2
NKX6-2Q9C056 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-2Q9C056 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.27■□□□□ 0.2
NKX6-2Q9C056 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX6-2Q9C056 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms