Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NOTCH4Q99466 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NOTCH4Q99466 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NOTCH4Q99466 AL117328.2-201ENST00000624617 1940 ntBASIC20.95■□□□□ 0.94
NOTCH4Q99466 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NOTCH4Q99466 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.95■□□□□ 0.94
NOTCH4Q99466 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NOTCH4Q99466 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.95■□□□□ 0.94
NOTCH4Q99466 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NOTCH4Q99466 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.95■□□□□ 0.94
NOTCH4Q99466 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NOTCH4Q99466 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NOTCH4Q99466 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NOTCH4Q99466 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NOTCH4Q99466 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
NOTCH4Q99466 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NOTCH4Q99466 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NOTCH4Q99466 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NOTCH4Q99466 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
NOTCH4Q99466 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NOTCH4Q99466 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.94■□□□□ 0.94
NOTCH4Q99466 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.94■□□□□ 0.94
NOTCH4Q99466 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.94■□□□□ 0.94
NOTCH4Q99466 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.94■□□□□ 0.94
NOTCH4Q99466 AC026471.5-201ENST00000615068 467 ntBASIC20.94■□□□□ 0.94
NOTCH4Q99466 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NOTCH4Q99466 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NOTCH4Q99466 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NOTCH4Q99466 FBXW4P1-201ENST00000426721 2239 ntBASIC20.94■□□□□ 0.94
NOTCH4Q99466 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NOTCH4Q99466 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.94■□□□□ 0.94
NOTCH4Q99466 EP400NL-214ENST00000641289 2402 ntBASIC20.94■□□□□ 0.94
NOTCH4Q99466 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
NOTCH4Q99466 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NOTCH4Q99466 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.94■□□□□ 0.94
NOTCH4Q99466 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
NOTCH4Q99466 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
NOTCH4Q99466 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NOTCH4Q99466 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NOTCH4Q99466 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NOTCH4Q99466 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NOTCH4Q99466 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.93■□□□□ 0.94
NOTCH4Q99466 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NOTCH4Q99466 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NOTCH4Q99466 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NOTCH4Q99466 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NOTCH4Q99466 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NOTCH4Q99466 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.93■□□□□ 0.94
NOTCH4Q99466 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
NOTCH4Q99466 HTR7P1-201ENST00000538670 1336 ntBASIC20.93■□□□□ 0.94
NOTCH4Q99466 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NOTCH4Q99466 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NOTCH4Q99466 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.92■□□□□ 0.94
NOTCH4Q99466 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NOTCH4Q99466 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NOTCH4Q99466 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NOTCH4Q99466 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NOTCH4Q99466 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.92■□□□□ 0.94
NOTCH4Q99466 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NOTCH4Q99466 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.92■□□□□ 0.94
NOTCH4Q99466 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NOTCH4Q99466 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NOTCH4Q99466 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NOTCH4Q99466 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NOTCH4Q99466 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NOTCH4Q99466 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.92■□□□□ 0.94
NOTCH4Q99466 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
NOTCH4Q99466 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NOTCH4Q99466 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NOTCH4Q99466 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NOTCH4Q99466 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
NOTCH4Q99466 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NOTCH4Q99466 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NOTCH4Q99466 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NOTCH4Q99466 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.92■□□□□ 0.94
NOTCH4Q99466 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NOTCH4Q99466 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NOTCH4Q99466 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
NOTCH4Q99466 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.91■□□□□ 0.94
NOTCH4Q99466 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NOTCH4Q99466 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NOTCH4Q99466 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NOTCH4Q99466 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.91■□□□□ 0.94
NOTCH4Q99466 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
NOTCH4Q99466 AL121603.2-201ENST00000557373 2117 ntBASIC20.91■□□□□ 0.94
NOTCH4Q99466 MIR6786-201ENST00000616843 113 ntBASIC20.91■□□□□ 0.94
NOTCH4Q99466 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.91■□□□□ 0.94
NOTCH4Q99466 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NOTCH4Q99466 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NOTCH4Q99466 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
NOTCH4Q99466 AC079598.2-202ENST00000546624 1451 ntBASIC20.9■□□□□ 0.94
NOTCH4Q99466 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NOTCH4Q99466 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NOTCH4Q99466 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.9■□□□□ 0.94
NOTCH4Q99466 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.9■□□□□ 0.94
NOTCH4Q99466 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NOTCH4Q99466 FAM197Y1-201ENST00000421178 764 ntBASIC20.9■□□□□ 0.94
NOTCH4Q99466 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NOTCH4Q99466 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.9■□□□□ 0.94
NOTCH4Q99466 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms