Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PHOX2BQ99453 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PHOX2BQ99453 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PHOX2BQ99453 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PHOX2BQ99453 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PHOX2BQ99453 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PHOX2BQ99453 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PHOX2BQ99453 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
PHOX2BQ99453 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PHOX2BQ99453 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PHOX2BQ99453 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PHOX2BQ99453 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.42■□□□□ 0.86
PHOX2BQ99453 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.42■□□□□ 0.86
PHOX2BQ99453 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PHOX2BQ99453 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
PHOX2BQ99453 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.42■□□□□ 0.86
PHOX2BQ99453 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.42■□□□□ 0.86
PHOX2BQ99453 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.42■□□□□ 0.86
PHOX2BQ99453 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PHOX2BQ99453 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
PHOX2BQ99453 CYP21A1P-202ENST00000354927 1481 ntBASIC20.42■□□□□ 0.86
PHOX2BQ99453 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.42■□□□□ 0.86
PHOX2BQ99453 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.41■□□□□ 0.86
PHOX2BQ99453 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PHOX2BQ99453 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PHOX2BQ99453 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PHOX2BQ99453 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PHOX2BQ99453 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PHOX2BQ99453 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PHOX2BQ99453 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PHOX2BQ99453 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.41■□□□□ 0.86
PHOX2BQ99453 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.41■□□□□ 0.86
PHOX2BQ99453 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.41■□□□□ 0.86
PHOX2BQ99453 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.41■□□□□ 0.86
PHOX2BQ99453 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PHOX2BQ99453 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PHOX2BQ99453 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.41■□□□□ 0.86
PHOX2BQ99453 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.41■□□□□ 0.86
PHOX2BQ99453 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.41■□□□□ 0.86
PHOX2BQ99453 LINC01960-201ENST00000563759 1884 ntBASIC20.41■□□□□ 0.86
PHOX2BQ99453 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.41■□□□□ 0.86
PHOX2BQ99453 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PHOX2BQ99453 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PHOX2BQ99453 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PHOX2BQ99453 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PHOX2BQ99453 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PHOX2BQ99453 AL353807.1-201ENST00000427475 662 ntBASIC20.4■□□□□ 0.86
PHOX2BQ99453 BX664615.1-201ENST00000443558 458 ntBASIC20.4■□□□□ 0.86
PHOX2BQ99453 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.4■□□□□ 0.86
PHOX2BQ99453 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PHOX2BQ99453 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.4■□□□□ 0.86
PHOX2BQ99453 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PHOX2BQ99453 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PHOX2BQ99453 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PHOX2BQ99453 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PHOX2BQ99453 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.39■□□□□ 0.85
PHOX2BQ99453 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.39■□□□□ 0.85
PHOX2BQ99453 AC023511.2-201ENST00000618803 211 ntBASIC20.39■□□□□ 0.85
PHOX2BQ99453 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.39■□□□□ 0.85
PHOX2BQ99453 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.39■□□□□ 0.85
PHOX2BQ99453 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.39■□□□□ 0.85
PHOX2BQ99453 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.39■□□□□ 0.85
PHOX2BQ99453 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.39■□□□□ 0.85
PHOX2BQ99453 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PHOX2BQ99453 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.39■□□□□ 0.85
PHOX2BQ99453 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.39■□□□□ 0.85
PHOX2BQ99453 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PHOX2BQ99453 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHOX2BQ99453 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHOX2BQ99453 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHOX2BQ99453 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHOX2BQ99453 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PHOX2BQ99453 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.38■□□□□ 0.85
PHOX2BQ99453 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHOX2BQ99453 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHOX2BQ99453 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHOX2BQ99453 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHOX2BQ99453 KRT16P5-201ENST00000455284 522 ntBASIC20.38■□□□□ 0.85
PHOX2BQ99453 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.38■□□□□ 0.85
PHOX2BQ99453 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PHOX2BQ99453 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHOX2BQ99453 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PHOX2BQ99453 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
PHOX2BQ99453 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
PHOX2BQ99453 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.38■□□□□ 0.85
PHOX2BQ99453 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
PHOX2BQ99453 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PHOX2BQ99453 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.37■□□□□ 0.85
PHOX2BQ99453 SLC25A24-204ENST00000569674 2357 ntBASIC20.37■□□□□ 0.85
PHOX2BQ99453 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.37■□□□□ 0.85
PHOX2BQ99453 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.37■□□□□ 0.85
PHOX2BQ99453 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.37■□□□□ 0.85
PHOX2BQ99453 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PHOX2BQ99453 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.37■□□□□ 0.85
PHOX2BQ99453 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.37■□□□□ 0.85
PHOX2BQ99453 LINC01238-205ENST00000567549 1107 ntBASIC20.37■□□□□ 0.85
PHOX2BQ99453 AC012313.10-201ENST00000623509 926 ntBASIC20.37■□□□□ 0.85
PHOX2BQ99453 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PHOX2BQ99453 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PHOX2BQ99453 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms