Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.89□□□□□ -0.03
ODF3Q96PU9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ODF3Q96PU9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ODF3Q96PU9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ODF3Q96PU9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.89□□□□□ -0.03
ODF3Q96PU9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.89□□□□□ -0.03
ODF3Q96PU9 KRT18P5-201ENST00000436075 1291 ntBASIC14.89□□□□□ -0.03
ODF3Q96PU9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
ODF3Q96PU9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.89□□□□□ -0.03
ODF3Q96PU9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.89□□□□□ -0.03
ODF3Q96PU9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ODF3Q96PU9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ODF3Q96PU9 AC016405.3-201ENST00000607710 860 ntBASIC14.89□□□□□ -0.03
ODF3Q96PU9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ODF3Q96PU9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
ODF3Q96PU9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.89□□□□□ -0.03
ODF3Q96PU9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ODF3Q96PU9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC14.89□□□□□ -0.03
ODF3Q96PU9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ODF3Q96PU9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ODF3Q96PU9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ODF3Q96PU9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.89□□□□□ -0.03
ODF3Q96PU9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ODF3Q96PU9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.89□□□□□ -0.03
ODF3Q96PU9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ODF3Q96PU9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.89□□□□□ -0.03
ODF3Q96PU9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.89□□□□□ -0.03
ODF3Q96PU9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.88□□□□□ -0.03
ODF3Q96PU9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ODF3Q96PU9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ODF3Q96PU9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ODF3Q96PU9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ODF3Q96PU9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.88□□□□□ -0.03
ODF3Q96PU9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ODF3Q96PU9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ODF3Q96PU9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.88□□□□□ -0.03
ODF3Q96PU9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ODF3Q96PU9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ODF3Q96PU9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.88□□□□□ -0.03
ODF3Q96PU9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ODF3Q96PU9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ODF3Q96PU9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ODF3Q96PU9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.88□□□□□ -0.03
ODF3Q96PU9 GXYLT1P2-201ENST00000433312 1230 ntBASIC14.88□□□□□ -0.03
ODF3Q96PU9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ODF3Q96PU9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.88□□□□□ -0.03
ODF3Q96PU9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ODF3Q96PU9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ODF3Q96PU9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ODF3Q96PU9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ODF3Q96PU9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ODF3Q96PU9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ODF3Q96PU9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ODF3Q96PU9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
ODF3Q96PU9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ODF3Q96PU9 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.88□□□□□ -0.03
ODF3Q96PU9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.88□□□□□ -0.03
ODF3Q96PU9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ODF3Q96PU9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC14.88□□□□□ -0.03
ODF3Q96PU9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ODF3Q96PU9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.87□□□□□ -0.03
ODF3Q96PU9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
ODF3Q96PU9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ODF3Q96PU9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.87□□□□□ -0.03
ODF3Q96PU9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ODF3Q96PU9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ODF3Q96PU9 AC006015.1-201ENST00000429970 570 ntBASIC14.87□□□□□ -0.03
ODF3Q96PU9 CNN2P6-201ENST00000439038 900 ntBASIC14.87□□□□□ -0.03
ODF3Q96PU9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.87□□□□□ -0.03
ODF3Q96PU9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ODF3Q96PU9 AC069236.1-201ENST00000604339 616 ntBASIC14.87□□□□□ -0.03
ODF3Q96PU9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.87□□□□□ -0.03
ODF3Q96PU9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ODF3Q96PU9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ODF3Q96PU9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ODF3Q96PU9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.87□□□□□ -0.03
ODF3Q96PU9 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.87□□□□□ -0.03
ODF3Q96PU9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ODF3Q96PU9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ODF3Q96PU9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.86□□□□□ -0.03
ODF3Q96PU9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.86□□□□□ -0.03
ODF3Q96PU9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ODF3Q96PU9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ODF3Q96PU9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.86□□□□□ -0.03
ODF3Q96PU9 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.86□□□□□ -0.03
ODF3Q96PU9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ODF3Q96PU9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ODF3Q96PU9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ODF3Q96PU9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.86□□□□□ -0.03
ODF3Q96PU9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ODF3Q96PU9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ODF3Q96PU9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ODF3Q96PU9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.86□□□□□ -0.03
ODF3Q96PU9 DUX4L16-201ENST00000555130 1264 ntBASIC14.86□□□□□ -0.03
ODF3Q96PU9 AC105020.6-201ENST00000621523 1217 ntBASIC14.86□□□□□ -0.03
ODF3Q96PU9 AC231657.2-201ENST00000624556 255 ntBASIC14.86□□□□□ -0.03
ODF3Q96PU9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ODF3Q96PU9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.86□□□□□ -0.03
ODF3Q96PU9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ODF3Q96PU9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms