Protein–RNA interactions for Protein: Q8WV41

SNX33, Sorting nexin-33, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33Q8WV41 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX33Q8WV41 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX33Q8WV41 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX33Q8WV41 AC104187.1-201ENST00000607510 612 ntBASIC18.15■□□□□ 0.5
SNX33Q8WV41 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SNX33Q8WV41 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX33Q8WV41 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX33Q8WV41 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX33Q8WV41 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX33Q8WV41 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX33Q8WV41 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SNX33Q8WV41 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX33Q8WV41 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNX33Q8WV41 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNX33Q8WV41 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SNX33Q8WV41 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX33Q8WV41 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.14■□□□□ 0.49
SNX33Q8WV41 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX33Q8WV41 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.14■□□□□ 0.49
SNX33Q8WV41 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX33Q8WV41 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNX33Q8WV41 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX33Q8WV41 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX33Q8WV41 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX33Q8WV41 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SNX33Q8WV41 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNX33Q8WV41 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX33Q8WV41 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX33Q8WV41 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX33Q8WV41 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.13■□□□□ 0.49
SNX33Q8WV41 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.13■□□□□ 0.49
SNX33Q8WV41 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX33Q8WV41 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX33Q8WV41 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX33Q8WV41 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.13■□□□□ 0.49
SNX33Q8WV41 KRT18P11-201ENST00000435214 1283 ntBASIC18.13■□□□□ 0.49
SNX33Q8WV41 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.13■□□□□ 0.49
SNX33Q8WV41 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX33Q8WV41 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX33Q8WV41 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX33Q8WV41 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.13■□□□□ 0.49
SNX33Q8WV41 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX33Q8WV41 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX33Q8WV41 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX33Q8WV41 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX33Q8WV41 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX33Q8WV41 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX33Q8WV41 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.12■□□□□ 0.49
SNX33Q8WV41 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX33Q8WV41 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX33Q8WV41 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNX33Q8WV41 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.12■□□□□ 0.49
SNX33Q8WV41 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.12■□□□□ 0.49
SNX33Q8WV41 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.12■□□□□ 0.49
SNX33Q8WV41 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
SNX33Q8WV41 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.12■□□□□ 0.49
SNX33Q8WV41 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.12■□□□□ 0.49
SNX33Q8WV41 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNX33Q8WV41 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX33Q8WV41 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SNX33Q8WV41 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNX33Q8WV41 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX33Q8WV41 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SNX33Q8WV41 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNX33Q8WV41 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX33Q8WV41 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SNX33Q8WV41 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.11■□□□□ 0.49
SNX33Q8WV41 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNX33Q8WV41 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNX33Q8WV41 AC245052.3-201ENST00000450182 901 ntBASIC18.11■□□□□ 0.49
SNX33Q8WV41 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.11■□□□□ 0.49
SNX33Q8WV41 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX33Q8WV41 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.11■□□□□ 0.49
SNX33Q8WV41 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.11■□□□□ 0.49
SNX33Q8WV41 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX33Q8WV41 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.11■□□□□ 0.49
SNX33Q8WV41 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX33Q8WV41 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX33Q8WV41 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.11■□□□□ 0.49
SNX33Q8WV41 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX33Q8WV41 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX33Q8WV41 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
SNX33Q8WV41 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNX33Q8WV41 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX33Q8WV41 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNX33Q8WV41 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SNX33Q8WV41 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
SNX33Q8WV41 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX33Q8WV41 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX33Q8WV41 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.1■□□□□ 0.49
SNX33Q8WV41 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX33Q8WV41 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX33Q8WV41 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX33Q8WV41 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX33Q8WV41 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.1■□□□□ 0.49
SNX33Q8WV41 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX33Q8WV41 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX33Q8WV41 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
SNX33Q8WV41 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNX33Q8WV41 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms