Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC24.07■■□□□ 1.44
TRPM4Q8TD43 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.07■■□□□ 1.44
TRPM4Q8TD43 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC24.07■■□□□ 1.44
TRPM4Q8TD43 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRPM4Q8TD43 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TRPM4Q8TD43 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRPM4Q8TD43 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRPM4Q8TD43 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRPM4Q8TD43 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC24.07■■□□□ 1.44
TRPM4Q8TD43 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC24.06■■□□□ 1.44
TRPM4Q8TD43 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
TRPM4Q8TD43 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TRPM4Q8TD43 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRPM4Q8TD43 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC24.06■■□□□ 1.44
TRPM4Q8TD43 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TRPM4Q8TD43 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC24.06■■□□□ 1.44
TRPM4Q8TD43 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.06■■□□□ 1.44
TRPM4Q8TD43 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC24.06■■□□□ 1.44
TRPM4Q8TD43 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRPM4Q8TD43 KRT16P1-201ENST00000399124 1418 ntBASIC24.06■■□□□ 1.44
TRPM4Q8TD43 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
TRPM4Q8TD43 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC24.06■■□□□ 1.44
TRPM4Q8TD43 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRPM4Q8TD43 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TRPM4Q8TD43 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
TRPM4Q8TD43 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
TRPM4Q8TD43 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC24.05■■□□□ 1.44
TRPM4Q8TD43 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRPM4Q8TD43 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC24.05■■□□□ 1.44
TRPM4Q8TD43 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRPM4Q8TD43 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TRPM4Q8TD43 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TRPM4Q8TD43 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC24.05■■□□□ 1.44
TRPM4Q8TD43 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC24.05■■□□□ 1.44
TRPM4Q8TD43 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC24.05■■□□□ 1.44
TRPM4Q8TD43 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC24.05■■□□□ 1.44
TRPM4Q8TD43 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC24.05■■□□□ 1.44
TRPM4Q8TD43 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC24.05■■□□□ 1.44
TRPM4Q8TD43 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
TRPM4Q8TD43 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC24.05■■□□□ 1.44
TRPM4Q8TD43 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
TRPM4Q8TD43 KRT8P36-201ENST00000489121 1440 ntBASIC24.04■■□□□ 1.44
TRPM4Q8TD43 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC24.04■■□□□ 1.44
TRPM4Q8TD43 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TRPM4Q8TD43 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC24.04■■□□□ 1.44
TRPM4Q8TD43 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC24.04■■□□□ 1.44
TRPM4Q8TD43 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
TRPM4Q8TD43 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC24.04■■□□□ 1.44
TRPM4Q8TD43 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRPM4Q8TD43 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC24.04■■□□□ 1.44
TRPM4Q8TD43 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC24.04■■□□□ 1.44
TRPM4Q8TD43 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRPM4Q8TD43 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRPM4Q8TD43 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRPM4Q8TD43 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC24.03■■□□□ 1.44
TRPM4Q8TD43 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRPM4Q8TD43 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC24.03■■□□□ 1.44
TRPM4Q8TD43 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRPM4Q8TD43 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRPM4Q8TD43 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC24.03■■□□□ 1.44
TRPM4Q8TD43 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TRPM4Q8TD43 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRPM4Q8TD43 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC24.03■■□□□ 1.44
TRPM4Q8TD43 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TRPM4Q8TD43 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TRPM4Q8TD43 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TRPM4Q8TD43 AC011484.1-201ENST00000377652 1995 ntBASIC24.03■■□□□ 1.44
TRPM4Q8TD43 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC24.03■■□□□ 1.44
TRPM4Q8TD43 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC24.03■■□□□ 1.44
TRPM4Q8TD43 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.02■■□□□ 1.44
TRPM4Q8TD43 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
TRPM4Q8TD43 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRPM4Q8TD43 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRPM4Q8TD43 GUK1-204ENST00000366721 689 ntTSL 3 BASIC24.02■■□□□ 1.44
TRPM4Q8TD43 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
TRPM4Q8TD43 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC24.02■■□□□ 1.44
TRPM4Q8TD43 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC24.02■■□□□ 1.44
TRPM4Q8TD43 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TRPM4Q8TD43 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC24.02■■□□□ 1.44
TRPM4Q8TD43 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC24.02■■□□□ 1.44
TRPM4Q8TD43 CLN6-221ENST00000637494 765 ntTSL 5 BASIC24.02■■□□□ 1.44
TRPM4Q8TD43 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
TRPM4Q8TD43 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRPM4Q8TD43 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRPM4Q8TD43 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TRPM4Q8TD43 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC24.02■■□□□ 1.43
TRPM4Q8TD43 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TRPM4Q8TD43 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC24.01■■□□□ 1.43
TRPM4Q8TD43 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRPM4Q8TD43 PRR31-201ENST00000371629 978 ntTSL 2 BASIC24.01■■□□□ 1.43
TRPM4Q8TD43 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRPM4Q8TD43 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC24.01■■□□□ 1.43
TRPM4Q8TD43 MESTP1-201ENST00000404287 994 ntBASIC24.01■■□□□ 1.43
TRPM4Q8TD43 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
TRPM4Q8TD43 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC24.01■■□□□ 1.43
TRPM4Q8TD43 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC24.01■■□□□ 1.43
TRPM4Q8TD43 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC24.01■■□□□ 1.43
TRPM4Q8TD43 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TRPM4Q8TD43 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRPM4Q8TD43 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms