Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 SUZ12P1-203ENST00000578195 985 ntBASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 MIR3665-201ENST00000578708 105 ntBASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 H19-210ENST00000439725 1929 ntTSL 2 BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 AC099398.1-201ENST00000567919 2776 ntBASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC11.09□□□□□ -0.63
SPTSSBQ8NFR3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
SPTSSBQ8NFR3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 TNXA-203ENST00000507684 2038 ntBASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC11.08□□□□□ -0.64
SPTSSBQ8NFR3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 AL513477.1-201ENST00000602865 2407 ntBASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 AC138969.2-201ENST00000532739 9932 ntBASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SPTSSBQ8NFR3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms