Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.16■□□□□ 0.98
TTC16Q8NEE8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TTC16Q8NEE8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TTC16Q8NEE8 RPS2P4-201ENST00000476944 856 ntBASIC21.16■□□□□ 0.98
TTC16Q8NEE8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TTC16Q8NEE8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TTC16Q8NEE8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TTC16Q8NEE8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TTC16Q8NEE8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.16■□□□□ 0.98
TTC16Q8NEE8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC16Q8NEE8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC16Q8NEE8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC16Q8NEE8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC16Q8NEE8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC16Q8NEE8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
TTC16Q8NEE8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.15■□□□□ 0.98
TTC16Q8NEE8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC16Q8NEE8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.15■□□□□ 0.98
TTC16Q8NEE8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.15■□□□□ 0.98
TTC16Q8NEE8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
TTC16Q8NEE8 AL359736.2-201ENST00000621992 437 ntBASIC21.15■□□□□ 0.98
TTC16Q8NEE8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TTC16Q8NEE8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC16Q8NEE8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC16Q8NEE8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC16Q8NEE8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
TTC16Q8NEE8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TTC16Q8NEE8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC16Q8NEE8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC16Q8NEE8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC16Q8NEE8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TTC16Q8NEE8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TTC16Q8NEE8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
TTC16Q8NEE8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.98
TTC16Q8NEE8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.14■□□□□ 0.98
TTC16Q8NEE8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.14■□□□□ 0.98
TTC16Q8NEE8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.14■□□□□ 0.97
TTC16Q8NEE8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
TTC16Q8NEE8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC16Q8NEE8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.14■□□□□ 0.97
TTC16Q8NEE8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.14■□□□□ 0.97
TTC16Q8NEE8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.14■□□□□ 0.97
TTC16Q8NEE8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.14■□□□□ 0.97
TTC16Q8NEE8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.14■□□□□ 0.97
TTC16Q8NEE8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.14■□□□□ 0.97
TTC16Q8NEE8 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.14■□□□□ 0.97
TTC16Q8NEE8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.14■□□□□ 0.97
TTC16Q8NEE8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TTC16Q8NEE8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TTC16Q8NEE8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC16Q8NEE8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC16Q8NEE8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.14■□□□□ 0.97
TTC16Q8NEE8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TTC16Q8NEE8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.14■□□□□ 0.97
TTC16Q8NEE8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC16Q8NEE8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC16Q8NEE8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 RPPH1-201ENST00000516869 333 ntBASIC21.13■□□□□ 0.97
TTC16Q8NEE8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC16Q8NEE8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 AC011484.1-201ENST00000377652 1995 ntBASIC21.12■□□□□ 0.97
TTC16Q8NEE8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.12■□□□□ 0.97
TTC16Q8NEE8 AC069544.1-201ENST00000609399 999 ntBASIC21.12■□□□□ 0.97
TTC16Q8NEE8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TTC16Q8NEE8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms