Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.85■□□□□ 0.61
PIK3C3Q8NEB9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
PIK3C3Q8NEB9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PIK3C3Q8NEB9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PIK3C3Q8NEB9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PIK3C3Q8NEB9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
PIK3C3Q8NEB9 AC125437.2-201ENST00000625180 2167 ntBASIC18.85■□□□□ 0.61
PIK3C3Q8NEB9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PIK3C3Q8NEB9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PIK3C3Q8NEB9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
PIK3C3Q8NEB9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PIK3C3Q8NEB9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 KRT87P-202ENST00000534226 1464 ntBASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PIK3C3Q8NEB9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.83■□□□□ 0.61
PIK3C3Q8NEB9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PIK3C3Q8NEB9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PIK3C3Q8NEB9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PIK3C3Q8NEB9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.83■□□□□ 0.61
PIK3C3Q8NEB9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.83■□□□□ 0.61
PIK3C3Q8NEB9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.83■□□□□ 0.61
PIK3C3Q8NEB9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PIK3C3Q8NEB9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PIK3C3Q8NEB9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PIK3C3Q8NEB9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PIK3C3Q8NEB9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PIK3C3Q8NEB9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PIK3C3Q8NEB9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PIK3C3Q8NEB9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PIK3C3Q8NEB9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.83■□□□□ 0.6
PIK3C3Q8NEB9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.83■□□□□ 0.6
PIK3C3Q8NEB9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.83■□□□□ 0.6
PIK3C3Q8NEB9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.83■□□□□ 0.6
PIK3C3Q8NEB9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PIK3C3Q8NEB9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.83■□□□□ 0.6
PIK3C3Q8NEB9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.83■□□□□ 0.6
PIK3C3Q8NEB9 KRT16P2-201ENST00000414673 1423 ntBASIC18.83■□□□□ 0.6
PIK3C3Q8NEB9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PIK3C3Q8NEB9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PIK3C3Q8NEB9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PIK3C3Q8NEB9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PIK3C3Q8NEB9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.82■□□□□ 0.6
PIK3C3Q8NEB9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.82■□□□□ 0.6
PIK3C3Q8NEB9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PIK3C3Q8NEB9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PIK3C3Q8NEB9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PIK3C3Q8NEB9 AC079140.4-201ENST00000507448 529 ntBASIC18.82■□□□□ 0.6
PIK3C3Q8NEB9 AC138907.5-202ENST00000569484 235 ntBASIC18.82■□□□□ 0.6
PIK3C3Q8NEB9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PIK3C3Q8NEB9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.82■□□□□ 0.6
PIK3C3Q8NEB9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PIK3C3Q8NEB9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PIK3C3Q8NEB9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 AL158211.5-201ENST00000623583 2518 ntBASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 AC245052.3-201ENST00000450182 901 ntBASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PIK3C3Q8NEB9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms